HHsearch alignment for GI: 254780289 and conserved domain: TIGR02233
>TIGR02233 Myxo_sigma_rel Myxococcus probable DNA-binding regulatory protein.
Probab=96.50 E-value=0.0054 Score=42.61 Aligned_cols=59 Identities=20% Similarity=0.369 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHH----HHHHHHHHH
Q ss_conf 999999999999997329988999999981879867468899989966789999----999999999
Q gi|254780289|r 603 SAIQANLRETTTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGKQFCVTRERI----RQIEAKAIR 665 (682)
Q Consensus 603 ~~~~~~~~~~~~~~l~~l~~re~~v~~~r~g~~~~~~~tl~e~~~~~~~~~er~----rqi~~~a~~ 665 (682)
T Consensus 8 ~~~R~~~~~al~~Ala~L~~~eR~lLRLH~----~~gLsldR~~~lY~~hrStvaR~v~~are~Ll~ 70 (106)
T TIGR02233 8 EEARQHLSAALSEALAALSERERTLLRLHH----VEGLSLDRLGTLYGVHRSTVARWVAGARELLLE 70 (106)
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHH----HCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 999999999999997528963335666776----236558999988478861699999999999999