HHsearch alignment for GI: 254780289 and conserved domain: TIGR02233

>TIGR02233 Myxo_sigma_rel Myxococcus probable DNA-binding regulatory protein.
Probab=96.50  E-value=0.0054  Score=42.61  Aligned_cols=59  Identities=20%  Similarity=0.369  Sum_probs=47.2

Q ss_pred             HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHH----HHHHHHHHH
Q ss_conf             999999999999997329988999999981879867468899989966789999----999999999
Q gi|254780289|r  603 SAIQANLRETTTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGKQFCVTRERI----RQIEAKAIR  665 (682)
Q Consensus       603 ~~~~~~~~~~~~~~l~~l~~re~~v~~~r~g~~~~~~~tl~e~~~~~~~~~er~----rqi~~~a~~  665 (682)
T Consensus         8 ~~~R~~~~~al~~Ala~L~~~eR~lLRLH~----~~gLsldR~~~lY~~hrStvaR~v~~are~Ll~   70 (106)
T TIGR02233         8 EEARQHLSAALSEALAALSERERTLLRLHH----VEGLSLDRLGTLYGVHRSTVARWVAGARELLLE   70 (106)
T ss_pred             HHHHHHHHHHHHHHHHCCCHHHHHHHHHHH----HCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf             999999999999997528963335666776----236558999988478861699999999999999