BLAST/PSIBLAST alignment of GI: 254780289 and GI: 222086540 at iteration 1
>gi|222086540|ref|YP_002545074.1| RNA polymerase sigma factor protein (sigma-70) [Agrobacterium radiobacter K84] Length = 687
>gi|221723988|gb|ACM27144.1| RNA polymerase sigma factor protein (sigma-70) [Agrobacterium radiobacter K84] Length = 687
 Score =  821 bits (2121), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 439/706 (62%), Positives = 526/706 (74%), Gaps = 45/706 (6%)

Query: 1   MTIGKKRNRDSDSEHEDSDDSLVFDFSDDSWKKMIKLARQRGYVTIEELNAFLPPDEVSS 60
           M    K N +++ E + + D  + D SDD+ KKMIK A++RGYVT++ELNA LP +EV+S
Sbjct: 1   MATKVKENEEAEVERDGTSDGPLLDLSDDAVKKMIKAAKKRGYVTMDELNAVLPSEEVTS 60

Query: 61  EQMEDTVAMLSNMGINVVDGDDLEDE-----------------EGSEDSLDLASSASNSS 103
           EQ+EDT+AMLS+MGINV++ +D+E+                  EG E    LA S + S+
Sbjct: 61  EQIEDTMAMLSDMGINVIEDEDVEEAGAATSSDDDDSSDDDNGEGGE----LAPS-TGSA 115

Query: 104 VFLQKRKDSADRSTDDPVRMYLREMGSIELLSREGEIAIAKRIEAGRAMMMASLCESPLT 163
           +   K+K+  DR TDDPVRMYLREMGS+ELLSREGEIAIAKRIEAGR  M+  LCESPLT
Sbjct: 116 LATAKKKEPTDR-TDDPVRMYLREMGSVELLSREGEIAIAKRIEAGRETMIGGLCESPLT 174

Query: 164 FQALIIWRDELNDGTTLLREIIDLEACI-GPESKGG-FFHGTEGHSYQKREDSSQEKERD 221
           FQALIIWRDELN+GTTLLREIIDLE    GPE+K    F   E     ++    +EK R 
Sbjct: 175 FQALIIWRDELNEGTTLLREIIDLETTYSGPEAKAAPQFQSPEKIEADRKAAEEKEKARR 234

Query: 222 DVQETEGDIESAAKVSKDDRSKVDSPPENAENDERNLDEDEDDSAHTLSAMEDQLRPKVM 281
             +   GD         DD + V       E +E + DE     A    AME +LRP+VM
Sbjct: 235 G-RSPSGD---------DDITDVGGEGLPGEEEEEDEDESSLSLA----AMEAELRPQVM 280

Query: 282 CALDEIAEVYRELRSLQDNAV------NGQKDEKSSVKCKVLKEKLVKLVGSLSLNQSRI 335
             LD IAE Y++LR LQD  V      +G        + K LK++LVK V SLSLNQ+RI
Sbjct: 281 TTLDTIAETYKKLRKLQDQQVEQRLSASGTLSSAQERRYKELKDELVKSVKSLSLNQNRI 340

Query: 336 DLLVEQLYDISKRIMHNEGELLRLAQSYGIKRDVFLERHQGRELDPHWVSYAKDFPEGEW 395
           D LVEQLYDI+KR++ NEG LLRLA+SYG+KRD FLE++QG ELDP+W+    +     W
Sbjct: 341 DALVEQLYDINKRLVQNEGRLLRLAESYGVKRDSFLEQYQGAELDPNWMKSIGNLAARGW 400

Query: 396 KNFVACEVDSILKIRNEIKSISVETGISISEFRHIVSMVRKGECEASIAKKEMVEANLRL 455
           K F   E  +I  IR EI++++ ETGISISEFR IV MV+KGE EA IAKKEMVEANLRL
Sbjct: 401 KEFAKSENTTIRDIRQEIQNLATETGISISEFRRIVHMVQKGEREARIAKKEMVEANLRL 460

Query: 456 VISVAKKYTNRGLQFLDLIQEGNIGLMKAAEKFDWCLGYKFSTYAMWWVKQAITRSIADQ 515
           VIS+AKKYTNRGLQFLDLIQEGNIGLMKA +KF++  GYKFSTYA WW++QAITRSIADQ
Sbjct: 461 VISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQ 520

Query: 516 SCTIRIPVHMRDKIHKVVRTARRMSNKIKREPTPEEIAKKLAMPVEGVRKVLKITKEPIS 575
           + TIRIPVHM + I+K+VRT+R+M ++I REPTPEE+A+KLAMP+E VRKVLKI KEPIS
Sbjct: 521 ARTIRIPVHMIETINKIVRTSRQMLHEIGREPTPEELAEKLAMPLEKVRKVLKIAKEPIS 580

Query: 576 LETPIGDEDTSHLGDFIEDKNAVSPLDSAIQANLRETTTRVLASLTPREERVLRMRFGIG 635
           LETP+GDE+ SHLGDFIEDKNA+ P+D+AIQANLRETTTRVLASLTPREERVLRMRFGIG
Sbjct: 581 LETPVGDEEDSHLGDFIEDKNALLPIDAAIQANLRETTTRVLASLTPREERVLRMRFGIG 640

Query: 636 MNTDHTLEEVGKQFCVTRERIRQIEAKAIRKLKHPSRSKKLRSFLD 681
           MNTDHTLEEVG+QF VTRERIRQIEAKA+RKLKHPSRS+KLRSFLD
Sbjct: 641 MNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRKLRSFLD 686