RPSBLAST alignment for GI: 254780289 and conserved domain: PRK05572

>gnl|CDD|180137 PRK05572, PRK05572, sporulation sigma factor SigF; Validated. Length = 252
 Score = 92.7 bits (231), Expect = 3e-19
 Identities = 75/259 (28%), Positives = 136/259 (52%), Gaps = 17/259 (6%)

Query: 412 EIKSISVETGISISEFRHIVSMVRKGECEASIAKKEMVEANLRLVISVAKKYTNRGLQFL 471
           E+K+   +  +   E + ++   + G+ EA   +  +VE NLRLV SV +++ NRG +  
Sbjct: 4   EVKNKKKKPQLKDEENKELIKKSQDGDQEA---RDTLVEKNLRLVWSVVQRFLNRGYEPD 60

Query: 472 DLIQEGNIGLMKAAEKFDWCLGYKFSTYAMWWVKQAITRSIADQSCTIRIPVHMRDKIHK 531
           DL Q G IGL+KA +KFD     KFSTYA+  +   I R + D   T+++   +++  +K
Sbjct: 61  DLFQIGCIGLLKAVDKFDLSYDVKFSTYAVPMIIGEIQRFLRDDG-TVKVSRSLKETANK 119

Query: 532 VVRTARRMSNKIKREPTPEEIAKKLAMPVEGVRKVLKITKEPISLETPI--GDEDTSHLG 589
           + +    +S ++ REPT EE+A+ L +  E V    + ++ P S+   +   D D   L 
Sbjct: 120 IRKDKDELSKELGREPTIEELAEYLGVTPEEVVLAQEASRSPQSIHETVHENDGDPITLL 179

Query: 590 DFIEDKNAVSPLDSAIQANLRETTTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGKQF 649
           D I D++     D   +  L+E     +  L  RE  ++ +R+      D T  EV K+ 
Sbjct: 180 DQIADQSEEDWFD---KIALKE----AIRELDERERLIVYLRY----FKDKTQSEVAKRL 228

Query: 650 CVTRERIRQIEAKAIRKLK 668
            +++ ++ ++E K ++++K
Sbjct: 229 GISQVQVSRLEKKILKQMK 247