RPSBLAST alignment for GI: 254780289 and conserved domain: PRK05572
>gnl|CDD|180137 PRK05572, PRK05572, sporulation sigma factor SigF; Validated. Length = 252
Score = 92.7 bits (231), Expect = 3e-19
Identities = 75/259 (28%), Positives = 136/259 (52%), Gaps = 17/259 (6%)
Query: 412 EIKSISVETGISISEFRHIVSMVRKGECEASIAKKEMVEANLRLVISVAKKYTNRGLQFL 471
E+K+ + + E + ++ + G+ EA + +VE NLRLV SV +++ NRG +
Sbjct: 4 EVKNKKKKPQLKDEENKELIKKSQDGDQEA---RDTLVEKNLRLVWSVVQRFLNRGYEPD 60
Query: 472 DLIQEGNIGLMKAAEKFDWCLGYKFSTYAMWWVKQAITRSIADQSCTIRIPVHMRDKIHK 531
DL Q G IGL+KA +KFD KFSTYA+ + I R + D T+++ +++ +K
Sbjct: 61 DLFQIGCIGLLKAVDKFDLSYDVKFSTYAVPMIIGEIQRFLRDDG-TVKVSRSLKETANK 119
Query: 532 VVRTARRMSNKIKREPTPEEIAKKLAMPVEGVRKVLKITKEPISLETPI--GDEDTSHLG 589
+ + +S ++ REPT EE+A+ L + E V + ++ P S+ + D D L
Sbjct: 120 IRKDKDELSKELGREPTIEELAEYLGVTPEEVVLAQEASRSPQSIHETVHENDGDPITLL 179
Query: 590 DFIEDKNAVSPLDSAIQANLRETTTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGKQF 649
D I D++ D + L+E + L RE ++ +R+ D T EV K+
Sbjct: 180 DQIADQSEEDWFD---KIALKE----AIRELDERERLIVYLRY----FKDKTQSEVAKRL 228
Query: 650 CVTRERIRQIEAKAIRKLK 668
+++ ++ ++E K ++++K
Sbjct: 229 GISQVQVSRLEKKILKQMK 247