RPSBLAST alignment for GI: 254780289 and conserved domain: PRK05901

>gnl|CDD|180310 PRK05901, PRK05901, RNA polymerase sigma factor; Provisional. Length = 509

 Score =  359 bits (923), Expect = 2e-99
 Identities = 138/238 (57%), Positives = 180/238 (75%)

Query: 444 AKKEMVEANLRLVISVAKKYTNRGLQFLDLIQEGNIGLMKAAEKFDWCLGYKFSTYAMWW 503
           AK  ++EANLRLV+S+AK+YTNRGL FLDLIQEGN+GL+KA EKFD+  GYKFSTYA WW
Sbjct: 272 AKNHLLEANLRLVVSLAKRYTNRGLSFLDLIQEGNLGLIKAVEKFDYTKGYKFSTYATWW 331

Query: 504 VKQAITRSIADQSCTIRIPVHMRDKIHKVVRTARRMSNKIKREPTPEEIAKKLAMPVEGV 563
           ++QAITR++ADQ+ TIRIPVHM + I+K+ R  R +  ++ REPTPEE+AK++    E V
Sbjct: 332 IRQAITRAMADQARTIRIPVHMVETINKLGRIERELLQELGREPTPEELAKEMGFTPEKV 391

Query: 564 RKVLKITKEPISLETPIGDEDTSHLGDFIEDKNAVSPLDSAIQANLRETTTRVLASLTPR 623
           R++ K  +EPISL+  IG E  S  GDFIED  AVSP+D+     L++    VL +L+ R
Sbjct: 392 REIQKYNREPISLDKTIGKEGDSQFGDFIEDSEAVSPVDAVSFTLLQDQLQEVLETLSER 451

Query: 624 EERVLRMRFGIGMNTDHTLEEVGKQFCVTRERIRQIEAKAIRKLKHPSRSKKLRSFLD 681
           E  V+RMRFG+      TL+E+G+ + VTRERIRQIE+K +RKL+HPSRS+ LR FLD
Sbjct: 452 EAGVIRMRFGLTDGQPKTLDEIGQVYGVTRERIRQIESKTLRKLRHPSRSQVLRDFLD 509