RPSBLAST alignment for GI: 254780289 and conserved domain: PRK05949
>gnl|CDD|180321 PRK05949, PRK05949, RNA polymerase sigma factor; Validated. Length = 327
Score = 228 bits (582), Expect = 4e-60
Identities = 105/237 (44%), Positives = 162/237 (68%), Gaps = 3/237 (1%)
Query: 444 AKKEMVEANLRLVISVAKKYTNRGLQFLDLIQEGNIGLMKAAEKFDWCLGYKFSTYAMWW 503
AK++M+EANLRLV+++AKKY R ++FLDLIQEG +GL + EKFD GYKFSTYA WW
Sbjct: 92 AKQKMIEANLRLVVAIAKKYQKRNMEFLDLIQEGTLGLERGVEKFDPTRGYKFSTYAYWW 151
Query: 504 VKQAITRSIADQSCTIRIPVHMRDKIHKVVRTARRMSNKIKREPTPEEIAKKLAMPVEGV 563
++QAITR+IA Q+ TIR+P+H+ +K++K+ +T R +S K+ R TP EIAK+L + +
Sbjct: 152 IRQAITRAIAQQARTIRLPIHITEKLNKIKKTQRELSQKLGRSATPAEIAKELELEPSQI 211
Query: 564 RKVLKITKEPISLETPIGDEDTSHLGDFIEDKNAVSPLDSAIQANLRETTTRVLASLTPR 623
R+ L + ++PISL+ +GD + L + +ED SP Q LR+ +LA LTP+
Sbjct: 212 REYLSMARQPISLDVRVGDNQDTELSELLED-EGPSPDQYITQELLRQDLNNLLAELTPQ 270
Query: 624 EERVLRMRFGIGMNTDHTLEEVGKQFCVTRERIRQIEAKAIRKLKHPSRSKKLRSFL 680
+ VL +RFG+ + +L +VG++ ++RER+RQ+E +A+ L+ R ++ +L
Sbjct: 271 QREVLTLRFGLEDGKELSLAKVGERLNLSRERVRQLEHQALAHLRR--RRANVKEYL 325