RPSBLAST alignment for GI: 254780289 and conserved domain: PRK05949

>gnl|CDD|180321 PRK05949, PRK05949, RNA polymerase sigma factor; Validated. Length = 327
 Score =  228 bits (582), Expect = 4e-60
 Identities = 105/237 (44%), Positives = 162/237 (68%), Gaps = 3/237 (1%)

Query: 444 AKKEMVEANLRLVISVAKKYTNRGLQFLDLIQEGNIGLMKAAEKFDWCLGYKFSTYAMWW 503
           AK++M+EANLRLV+++AKKY  R ++FLDLIQEG +GL +  EKFD   GYKFSTYA WW
Sbjct: 92  AKQKMIEANLRLVVAIAKKYQKRNMEFLDLIQEGTLGLERGVEKFDPTRGYKFSTYAYWW 151

Query: 504 VKQAITRSIADQSCTIRIPVHMRDKIHKVVRTARRMSNKIKREPTPEEIAKKLAMPVEGV 563
           ++QAITR+IA Q+ TIR+P+H+ +K++K+ +T R +S K+ R  TP EIAK+L +    +
Sbjct: 152 IRQAITRAIAQQARTIRLPIHITEKLNKIKKTQRELSQKLGRSATPAEIAKELELEPSQI 211

Query: 564 RKVLKITKEPISLETPIGDEDTSHLGDFIEDKNAVSPLDSAIQANLRETTTRVLASLTPR 623
           R+ L + ++PISL+  +GD   + L + +ED    SP     Q  LR+    +LA LTP+
Sbjct: 212 REYLSMARQPISLDVRVGDNQDTELSELLED-EGPSPDQYITQELLRQDLNNLLAELTPQ 270

Query: 624 EERVLRMRFGIGMNTDHTLEEVGKQFCVTRERIRQIEAKAIRKLKHPSRSKKLRSFL 680
           +  VL +RFG+    + +L +VG++  ++RER+RQ+E +A+  L+   R   ++ +L
Sbjct: 271 QREVLTLRFGLEDGKELSLAKVGERLNLSRERVRQLEHQALAHLRR--RRANVKEYL 325