HHsearch alignment for GI: 254780290 and conserved domain: COG2910
>COG2910 Putative NADH-flavin reductase [General function prediction only].
Probab=93.32 E-value=0.015 Score=35.99 Aligned_cols=92 Identities=20% Similarity=0.275 Sum_probs=59.2
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 22211344444322222122222222111223221111112233--2222222221111222222222111222211111
Q gi|254780290|r 148 TVLIHGGSSGIGTTAIQLASYFGATVYTTAKSEEKCLACLKLGA--KHAINYLKEDFLEILQKETQGRGIDIILDMVGAE 225 (332)
Q Consensus 148 ~vlV~ga~g~vG~~a~qla~~~G~~vi~~~~~~~~~~~~~~lGa--~~vi~~~~~~~~~~i~~~t~g~g~Divid~~G~~ 225 (332)
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~~i~q~Difd~~~------~a~~l--~g~DaVIsA~~~~ 73 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQGVTILQKDIFDLTS------LASDL--AGHDAVISAFGAG 73 (211)
T ss_pred EEEEEECCCHHHHHHHHHHHHCCCEEEEEEECHHHCCCCCCCEEECCCCCCHHH------HHHHH--CCCCEEEEECCCC
T ss_conf 078995374567999999986798048998076766522353020002227456------67663--5876699721578
Q ss_pred ---C-------CCCCCCCCCCC--CCCEEEEECC
Q ss_conf ---1-------22222112234--5304798337
Q gi|254780290|r 226 ---Y-------LNQHLTLLSKE--GKLIIISFLG 247 (332)
Q Consensus 226 ---~-------~~~~~~~l~~~--G~iv~~G~~~ 247 (332)
T Consensus 74 ~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAG 107 (211)
T COG2910 74 ASDNDELHSKSIEALIEALKGAGVPRLLVVGGAG 107 (211)
T ss_pred CCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC
T ss_conf 8871577888999999998615970599984742