HHsearch alignment for GI: 254780290 and conserved domain: TIGR01963
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase; InterPro: IPR011294 This entry represents a subfamily of the short chain dehydrogenases. Characterised members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polymers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.; GO: 0003858 3-hydroxybutyrate dehydrogenase activity.
Probab=96.07 E-value=0.00076 Score=44.56 Aligned_cols=176 Identities=20% Similarity=0.291 Sum_probs=93.1
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCC----CCCCC---CCCCCCCCC----CCCCCCCCCCC
Q ss_conf 2222211344444322222122222222111223--22111111----22332---222222221----11122222222
Q gi|254780290|r 146 GQTVLIHGGSSGIGTTAIQLASYFGATVYTTAKS--EEKCLACL----KLGAK---HAINYLKED----FLEILQKETQG 212 (332)
Q Consensus 146 g~~vlV~ga~g~vG~~a~qla~~~G~~vi~~~~~--~~~~~~~~----~lGa~---~vi~~~~~~----~~~~i~~~t~g 212 (332)
T Consensus 1 ~ktalVTGaaSGIG~~iA~~LA~aGa~v~~~d~~~~~~~~~~~~~~~~~~G~~v~~~~~D~T~~~e~~~~~~~~~~~fG- 79 (258)
T TIGR01963 1 GKTALVTGAASGIGLAIAKALAAAGANVVVNDLGEADEGAEAAAKVATDAGGSVIYLVADVTKEEEIADMIQAVAAEFG- 79 (258)
T ss_pred CCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHC-
T ss_conf 9489996587167899999998729889984678878999999999996188357751478888999999999999856-
Q ss_pred CCCCCCCCCCCC---C-----------------------CCCCCCCCCCC--CC-CCEEEEECCCCCCCCCC--------
Q ss_conf 211122221111---1-----------------------12222211223--45-30479833787543222--------
Q gi|254780290|r 213 RGIDIILDMVGA---E-----------------------YLNQHLTLLSK--EG-KLIIISFLGGNIATEIN-------- 255 (332)
Q Consensus 213 ~g~Divid~~G~---~-----------------------~~~~~~~~l~~--~G-~iv~~G~~~~~~~~~~~-------- 255 (332)
T Consensus 80 -~~DiLVNNAG~QhVaPiEeFP~~~w~~iiav~LtsaF~t~raAlP~Mk~~gwGGRIiNIAS~HGLvASp~KSAYVAAKH 158 (258)
T TIGR01963 80 -GLDILVNNAGIQHVAPIEEFPPEKWDRIIAVMLTSAFHTIRAALPHMKKQGWGGRIINIASVHGLVASPFKSAYVAAKH 158 (258)
T ss_pred -CCCEEEECCCEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHH
T ss_conf -8874884464014176547786678737302168889999750643213785537997101000003532134567743
Q ss_pred ----CCH-----HHCCCCEEEEEEECCCHHCCHH---HHHHHHHH------HHHHHHHCCCCCCCCEEEE-EHHHHHHHH
Q ss_conf ----433-----4305321677751240001137---89999999------9999998698310212474-189999999
Q gi|254780290|r 256 ----LNP-----IISKRITITGSTLRRRTDIAKQ---SIRDSLQL------KIWPLLNSHVIAPVIHTVL-PLGKVAMAH 316 (332)
Q Consensus 256 ----~~~-----~~~~~~~i~g~~~~~~~~~~~~---~~~~~~~~------~~~~~i~~g~l~p~i~~~~-~l~~i~~A~ 316 (332)
T Consensus 159 G~~GLTKv~ALE~A~~giT~NaiC--PGYV~TPLV~~Qi~DqAk~rGi~eE~V~~---~VmL~~~P~k~F~~~~e~A~~a 233 (258)
T TIGR01963 159 GLIGLTKVLALEVAAHGITANAIC--PGYVRTPLVEKQIADQAKTRGIPEEQVIR---EVMLKKQPTKRFVTVDEVAETA 233 (258)
T ss_pred HHHHHHHHHHHHCCCCCCEEEEEC--CCCCCCHHHHHHHHHHHHHCCCCHHHHHH---HHCCCCCCCCCCCCHHHHHHHH
T ss_conf 021211555542047887586672--87567554676589998651889988889---8607888984113799999999
Q ss_pred HHHHC---CCCCCEE
Q ss_conf 99982---9981328
Q gi|254780290|r 317 DIMEK---SEHIGKI 328 (332)
Q Consensus 317 ~~l~~---g~~~GKv 328 (332)
T Consensus 234 ~fLaS~~A~~~TG~~ 248 (258)
T TIGR01963 234 LFLASDAAAGITGQA 248 (258)
T ss_pred HHHCCHHHHCCCCEE
T ss_conf 984173442366207