HHsearch alignment for GI: 254780290 and conserved domain: cd01078
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=96.15 E-value=0.0043 Score=39.58 Aligned_cols=90 Identities=20% Similarity=0.283 Sum_probs=54.9
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-----CCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2222221134444432222212222222211122322111111-----223322-2222222111122222222211122
Q gi|254780290|r 145 SGQTVLIHGGSSGIGTTAIQLASYFGATVYTTAKSEEKCLACL-----KLGAKH-AINYLKEDFLEILQKETQGRGIDII 218 (332)
Q Consensus 145 ~g~~vlV~ga~g~vG~~a~qla~~~G~~vi~~~~~~~~~~~~~-----~lGa~~-vi~~~~~~~~~~i~~~t~g~g~Div 218 (332)
T Consensus 27 ~g~~~~V~G~tG~vG~~~A~~lA~~Ga~v~lv~R~~ek~~~~a~~i~~r~g~~~~~~~~~~~---~~~~~~l--~~adiV 101 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDD---AARAAAI--KGADVV 101 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCH---HHHHHHH--CCCCEE
T ss_conf 79889998588578999999999839979999587888999999999970987311357887---7899774--669899
Q ss_pred CCCCCC--CCCCCCCCCCCCCCCC
Q ss_conf 221111--1122222112234530
Q gi|254780290|r 219 LDMVGA--EYLNQHLTLLSKEGKL 240 (332)
Q Consensus 219 id~~G~--~~~~~~~~~l~~~G~i 240 (332)
T Consensus 102 ~~a~aAGv~~~~~~~~~~k~-l~V 124 (194)
T cd01078 102 FAAGAAGVELLEKLAWAPKP-LAV 124 (194)
T ss_pred EECCHHHHHHHHHHHHCCCC-CEE
T ss_conf 96427778887888850888-659