>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

 Score =  251 bits (644), Expect = 2e-67
 Identities = 113/333 (33%), Positives = 172/333 (51%), Gaps = 20/333 (6%)

Query: 7   MRHVAMSGYGKSNVMFLAESPIPQPQKE-EILIKVEAIGVNRPDVMQRKGLY---PPPKN 62
           M+ V     G    + L E P P+P    E+ I+VEA GVN PD++  +G Y   PP   
Sbjct: 1   MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPL-- 57

Query: 63  ANP-ILGLEVAGKIVDLGENTTHWNIGDEVCALVNGGGYAEYCLSHQGHTLPIPKGYNAI 121
             P + G EVAG +  +GE  T + +GD V AL   GG+AE  +       P+P G +  
Sbjct: 58  --PFVPGSEVAGVVEAVGEGVTGFKVGDRVVALTGQGGFAEEVVVPAAAVFPLPDGLSFE 115

Query: 122 QAASLPESFFTVWANLFQTANLRSGQTVLIHGGSSGIGTTAIQLASYFGATVYTTAKSEE 181
           +AA+LP ++ T +  L + A L+ G+TVL+ G + G+G  A+QLA   GA V   A SEE
Sbjct: 116 EAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEE 175

Query: 182 KCLACLKLGAKHAINYLKEDFLEILQKETQGRGIDIILDMVGAEYLNQHLTLLSKEGKLI 241
           K      LGA H I+Y   D  E ++  T GRG+D++ D VG +     L  L+  G+L+
Sbjct: 176 KLALARALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGGDVFEASLRSLAWGGRLL 235

Query: 242 IISFLGGNIATEINLNPIISKRITITG----STLRRRTDIAKQSIRDSLQLKIWPLLNSH 297
           +I F  G I   I  N ++ K I++ G    +  RR  ++ + ++ +     ++ LL   
Sbjct: 236 VIGFASGEIPQ-IPANLLLLKNISVVGVYWGAYARREPELLRANLAE-----LFDLLAEG 289

Query: 298 VIAPVIHTVLPLGKVAMAHDIMEKSEHIGKIIL 330
            I P +  V PL + A A   +   +  GK++L
Sbjct: 290 KIRPHVSAVFPLEQAAEALRALADRKATGKVVL 322