RPSBLAST alignment for GI: 254780290 and conserved domain: cd08268
>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328
Score = 232 bits (594), Expect = 9e-62
Identities = 115/340 (33%), Positives = 164/340 (48%), Gaps = 26/340 (7%)
Query: 7 MRHVAMSGYGKSNVMFLAESPIPQPQKEEILIKVEAIGVNRPDVMQRKGLYPPPKNANPI 66
MR V +G V+ + E P+P P E+LI+VEAIG+NR D M R+G Y P
Sbjct: 1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPAR 60
Query: 67 LGLEVAGKIVDLGENTTHWNIGDEVCA-----LVNGGGYAEYCLSHQGHTLPIPKGYNAI 121
LG E AG + +G T + +GD V L G YAEY L + +P G + +
Sbjct: 61 LGYEAAGVVEAVGAGVTGFAVGDRVSVIPAADLGQYGTYAEYALVPAAAVVKLPDGLSFV 120
Query: 122 QAASLPESFFTVWANLFQTANLRSGQTVLIHGGSSGIGTTAIQLASYFGATVYTTAKSEE 181
+AA+L + T + L + A LR G +VLI SS +G AIQ+A+ GATV T ++ E
Sbjct: 121 EAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSE 180
Query: 182 KCLACLKLGAKHAINYLKEDFLEILQKETQGRGIDIILDMVGAEYLNQHLTLLSKEGKLI 241
K A L LGA H I +ED + + + T G+G+D++ D VG + L+ G L+
Sbjct: 181 KRDALLALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGPQFAKLADALAPGGTLV 240
Query: 242 IISFLGGNIATEINLNPIISKRITITGSTL---------RRRTDIAKQSIRDSLQLKIWP 292
+ L G + K +T G +L RRR A I D
Sbjct: 241 VYGALSGEPTPFPLKAA-LKKSLTFRGYSLDEITLDPEARRR---AIAFILD-------- 288
Query: 293 LLNSHVIAPVIHTVLPLGKVAMAHDIMEKSEHIGKIILLP 332
L S + PV+ V P + AH +E + IGKI++ P
Sbjct: 289 GLASGALKPVVDRVFPFDDIVEAHRYLESGQQIGKIVVTP 328