HHsearch alignment of GI: 254780291 and MMDB domain: 1ii7_A_
>1ii7_A (A:) MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus}
Probab=98.21 E-value=1.5e-06 Score=62.62 Aligned_cols=192 Identities=10% Similarity=-0.071 Sum_probs=104.0
Q ss_pred EEEEECCCEECCC----------HHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHH------HHHHHHHHCCCCCEEECC
Q ss_conf 1555133100463----------146889998861165678976051001212677------888886726557513024
Q gi|254780291|r 162 IAVIADPWYKADT----------PMFVEAINSLKSSKNIILGILTGDMTQSSTTKE------LKRFYNIYSLKFPFFRGL 225 (475)
Q Consensus 162 ~~~~~~pw~k~~~----------~~~vesinsl~~~~~~~~gIINGDLTeFG~q~q------L~eFr~Vwnl~iPv~lGL 225 (475)
|++++|.-+-... .-.++.+.......+.-|-++.||+++.+.... ...+....+.++|++.-+
T Consensus 3 il~~sD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~ 82 (333)
T 1ii7_A 3 FAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVFAIE 82 (333)
T ss_dssp EEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCEEEEC
T ss_pred EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 99992476898776613668999999999999999749999998988788997998999999987776651398579826
Q ss_pred CCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEEEEEEEEEEEEE
Q ss_conf 55444788-87667454550000036888999999998776555666542100100134445655210377754433430
Q gi|254780291|r 226 GSQEYIGN-RPCRDPYTLTPSIYGCAFIAINDISQQINDHYPQIKSIKEFNGDSQRYRNRSWHGETYSISISGSQSYSWN 304 (475)
Q Consensus 226 GNHDYqNN-~dC~~P~~~d~s~n~CA~sav~~M~s~I~dy~~q~s~i~efN~Ds~~y~~~~~~~~~~~vei~GSLSYSWd 304 (475)
||||+..+ .... +.... ......... . ........+.+.
T Consensus 83 GNHD~~~~~~~~~---------------------~~~~~----------~~~~~~~~~-~--------~~~~~~~~~~~~ 122 (333)
T 1ii7_A 83 GNHDRTQRGPSVL---------------------NLLED----------FGLVYVIGM-R--------KEKVENEYLTSE 122 (333)
T ss_dssp CTTTCCSSSCCHH---------------------HHHHH----------TTSCEECEE-E--------SSCCCSSSEEEE
T ss_pred CCCCCCCCCCHHH---------------------HHHHH----------CCCEEECCC-C--------CCCCCCEEECCC
T ss_conf 7546656641367---------------------78986----------597076134-3--------211222032034
Q ss_pred CCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCC--
Q ss_conf 273355540364103675167530012222100025651134320565577887888884034795799950047720--
Q gi|254780291|r 305 IDNVHFIQANYSMFHSVYFNDEWSNIFTVAVPEHISKQDLPSHVSNGSEISQWIRDDVFQAQREGKYIILFADDIDRF-- 382 (475)
Q Consensus 305 ~gdvHfVQ~NYpsy~~V~~n~~~~~af~Iqv~n~Id~q~l~s~Vn~~~~iskWL~~DL~~A~~~gK~IILN~HD~~~~-- 382 (475)
+++.++.-.......... .-.-.......+|+.+++.++...+..+|+.+|.....
T Consensus 123 ~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~ 180 (333)
T 1ii7_A 123 RLGNGEYLVKGVYKDLEI----------------------HGMKYMSSAWFEANKEILKRLFRPTDNAILMLHQGVREVS 180 (333)
T ss_dssp ECTTSCEEEEEEETTEEE----------------------EEECCCCHHHHHSSTTHHHHHCCCCSSEEEEEECCBHHHH
T ss_pred CCCCCCEEECCCCCCEEE----------------------ECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCC
T ss_conf 446420230356676379----------------------6564512667889999876520567765877311335666
Q ss_pred -HHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCC
Q ss_conf -038999999999985896179998642367652
Q gi|254780291|r 383 -SSIDQKRMFEKFLTQSKISTIFTTRFTSSPESY 415 (475)
Q Consensus 383 -sSi~~KrmFks~itk~nV~AIF~aH~Hqshe~~ 415 (475)
........+...+..++|.+||.||.|+.....
T Consensus 181 ~~~~~~~~~~~~~~~~~~v~~v~~GH~H~~~~~~ 214 (333)
T 1ii7_A 181 EARGEDYFEIGLGDLPEGYLYYALGHIHKRYETS 214 (333)
T ss_dssp HTTTCCCCSBCGGGSCTTCSEEEEESCSSCEEEE
T ss_pred CCCCCCCCCCHHHHHCCCCCEEEECCCCCCEECC
T ss_conf 7777555420134521378789868656621604