HHsearch results for GI: 254780291 and protein with PDBid: 2yvt_A
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national project on protein structural and functional analyses; 1.60A {Aquifex aeolicus VF5} SCOP: d.159.1.6
Probab=98.52 E-value=1.7e-06 Score=61.31 Aligned_cols=217 Identities=10% Similarity=0.072 Sum_probs=112.8
Q ss_pred CCEEEEECCCEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHH---------------------------HHHHH
Q ss_conf 551555133100463146889998861165678976051001212677---------------------------88888
Q gi|254780291|r 160 KGIAVIADPWYKADTPMFVEAINSLKSSKNIILGILTGDMTQSSTTKE---------------------------LKRFY 212 (475)
Q Consensus 160 ~~~~~~~~pw~k~~~~~~vesinsl~~~~~~~~gIINGDLTeFG~q~q---------------------------L~eFr 212 (475)
+-|++|.|=--.-+ +.+.+..+...+++-+=++.|||++.|...+ ++++.
T Consensus 6 ~~i~~isD~h~~~~---~l~~l~~~~~~~~~D~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (260)
T 2yvt_A 6 RKVLAIKNFKERFD---LLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFF 82 (260)
T ss_dssp CEEEEEECCTTCGG---GHHHHHHHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECCCCCHH---HHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHH
T ss_conf 58999953799989---999999988774999999916878999875899999987645455077502663188999999
Q ss_pred HHH-CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCC
Q ss_conf 672-6557513024554447888766745455000003688899999999877655566654210010013444565521
Q gi|254780291|r 213 NIY-SLKFPFFRGLGSQEYIGNRPCRDPYTLTPSIYGCAFIAINDISQQINDHYPQIKSIKEFNGDSQRYRNRSWHGETY 291 (475)
Q Consensus 213 ~Vw-nl~iPv~lGLGNHDYqNN~dC~~P~~~d~s~n~CA~sav~~M~s~I~dy~~q~s~i~efN~Ds~~y~~~~~~~~~~ 291 (475)
+.. +...|++.=.||||.-.... +....... ............
T Consensus 83 ~~~~~~~~~~~~i~GNHD~~~~~~---------------------~~~~~~~~---------~~~~~~~~~~~~------ 126 (260)
T 2yvt_A 83 REIGELGVKTFVVPGKNDAPLKIF---------------------LRAAYEAE---------TAYPNIRVLHEG------ 126 (260)
T ss_dssp HHHHTTCSEEEEECCTTSCCHHHH---------------------HHHHHHTT---------TTCTTEEECSSE------
T ss_pred HHHHHCCCCEEEECCCCCHHHHHH---------------------HHHHCCCC---------CCCCCCCCCCCE------
T ss_conf 999855996388628861766545---------------------66641642---------123442123424------
Q ss_pred EEEEEEEEEEEEECCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCE
Q ss_conf 03777544334302733555403641036751675300122221000256511343205655778878888840347957
Q gi|254780291|r 292 SISISGSQSYSWNIDNVHFIQANYSMFHSVYFNDEWSNIFTVAVPEHISKQDLPSHVSNGSEISQWIRDDVFQAQREGKY 371 (475)
Q Consensus 292 ~vei~GSLSYSWd~gdvHfVQ~NYpsy~~V~~n~~~~~af~Iqv~n~Id~q~l~s~Vn~~~~iskWL~~DL~~A~~~gK~ 371 (475)
.+...+ +.+-.+...+.- ... ...++ ........-.|++..+.+.. ...
T Consensus 127 ~~~~~~---~~~~~~~~~~~~--~~~---------~~~~~---------------~~~~~~~~~~~~~~~~~~~~--~~~ 175 (260)
T 2yvt_A 127 FAGWRG---EFEVIGFGGLLT--EHE---------FEEDF---------------VLKYPRWYVEYILKFVNELK--PRR 175 (260)
T ss_dssp EEEETT---TEEEEEECSEEE--SSC---------CBSSS---------------SCEEEHHHHHHHGGGGGGSC--CCE
T ss_pred EEEECC---CEEEEEECCCCC--CCC---------CCHHH---------------HHHHHHHHHHHHHHHHHHHC--CCC
T ss_conf 899539---779998457768--744---------53044---------------44345678999987653202--355
Q ss_pred EEEECCCCCCC---------HHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEE
Q ss_conf 99950047720---------038999999999985896179998642367652465553101389704564671899996
Q gi|254780291|r 372 IILFADDIDRF---------SSIDQKRMFEKFLTQSKISTIFTTRFTSSPESYIKDSTGRPVRVYNINKNSKNEFILLEM 442 (475)
Q Consensus 372 IILN~HD~~~~---------sSi~~KrmFks~itk~nV~AIF~aH~Hqshe~~lec~~GykVPvy~iGSvpkNrF~~lem 442 (475)
+++.+|-.+.. ........+...++..++..++.||.|+.... .++.++++.||+..++|..+|+
T Consensus 176 ~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~GH~H~~~~~------~g~~~iv~pGs~~~~~y~~i~~ 249 (260)
T 2yvt_A 176 LVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVGKGHEL------VGNTIVVNPGEFEEGRYAFLDL 249 (260)
T ss_dssp EEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSCCEEEE------ETTEEEEECCBGGGTEEEEEET
T ss_pred EEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCEEE------ECCEEEEECCCCCCCCEEEEEE
T ss_conf 0578853873224554532220136799999987619979999544688487------5987999899554491799998
Q ss_pred CCCEEEEEEE
Q ss_conf 4885999998
Q gi|254780291|r 443 TPHYINVTAY 452 (475)
Q Consensus 443 ~~~~atITgY 452 (475)
+++.+.+.-|
T Consensus 250 ~~~~~~~~~~ 259 (260)
T 2yvt_A 250 TQHKIKLEQF 259 (260)
T ss_dssp TTTEEEEEEC
T ss_pred CCCEEEEEEC
T ss_conf 3996999977