HHsearch results for GI: 254780291 and protein with PDBid: 2yvt_A

>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national project on protein structural and functional analyses; 1.60A {Aquifex aeolicus VF5} SCOP: d.159.1.6
Probab=98.52  E-value=1.7e-06  Score=61.31  Aligned_cols=217  Identities=10%  Similarity=0.072  Sum_probs=112.8

Q ss_pred             CCEEEEECCCEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHH---------------------------HHHHH
Q ss_conf             551555133100463146889998861165678976051001212677---------------------------88888
Q gi|254780291|r  160 KGIAVIADPWYKADTPMFVEAINSLKSSKNIILGILTGDMTQSSTTKE---------------------------LKRFY  212 (475)
Q Consensus       160 ~~~~~~~~pw~k~~~~~~vesinsl~~~~~~~~gIINGDLTeFG~q~q---------------------------L~eFr  212 (475)
                      +-|++|.|=--.-+   +.+.+..+...+++-+=++.|||++.|...+                           ++++.
T Consensus         6 ~~i~~isD~h~~~~---~l~~l~~~~~~~~~D~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (260)
T 2yvt_A            6 RKVLAIKNFKERFD---LLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFF   82 (260)
T ss_dssp             CEEEEEECCTTCGG---GHHHHHHHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEECCCCCHH---HHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHH
T ss_conf             58999953799989---999999988774999999916878999875899999987645455077502663188999999


Q ss_pred             HHH-CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCC
Q ss_conf             672-6557513024554447888766745455000003688899999999877655566654210010013444565521
Q gi|254780291|r  213 NIY-SLKFPFFRGLGSQEYIGNRPCRDPYTLTPSIYGCAFIAINDISQQINDHYPQIKSIKEFNGDSQRYRNRSWHGETY  291 (475)
Q Consensus       213 ~Vw-nl~iPv~lGLGNHDYqNN~dC~~P~~~d~s~n~CA~sav~~M~s~I~dy~~q~s~i~efN~Ds~~y~~~~~~~~~~  291 (475)
                      +.. +...|++.=.||||.-....                     +.......         ............      
T Consensus        83 ~~~~~~~~~~~~i~GNHD~~~~~~---------------------~~~~~~~~---------~~~~~~~~~~~~------  126 (260)
T 2yvt_A           83 REIGELGVKTFVVPGKNDAPLKIF---------------------LRAAYEAE---------TAYPNIRVLHEG------  126 (260)
T ss_dssp             HHHHTTCSEEEEECCTTSCCHHHH---------------------HHHHHHTT---------TTCTTEEECSSE------
T ss_pred             HHHHHCCCCEEEECCCCCHHHHHH---------------------HHHHCCCC---------CCCCCCCCCCCE------
T ss_conf             999855996388628861766545---------------------66641642---------123442123424------


Q ss_pred             EEEEEEEEEEEEECCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCE
Q ss_conf             03777544334302733555403641036751675300122221000256511343205655778878888840347957
Q gi|254780291|r  292 SISISGSQSYSWNIDNVHFIQANYSMFHSVYFNDEWSNIFTVAVPEHISKQDLPSHVSNGSEISQWIRDDVFQAQREGKY  371 (475)
Q Consensus       292 ~vei~GSLSYSWd~gdvHfVQ~NYpsy~~V~~n~~~~~af~Iqv~n~Id~q~l~s~Vn~~~~iskWL~~DL~~A~~~gK~  371 (475)
                      .+...+   +.+-.+...+.-  ...         ...++               ........-.|++..+.+..  ...
T Consensus       127 ~~~~~~---~~~~~~~~~~~~--~~~---------~~~~~---------------~~~~~~~~~~~~~~~~~~~~--~~~  175 (260)
T 2yvt_A          127 FAGWRG---EFEVIGFGGLLT--EHE---------FEEDF---------------VLKYPRWYVEYILKFVNELK--PRR  175 (260)
T ss_dssp             EEEETT---TEEEEEECSEEE--SSC---------CBSSS---------------SCEEEHHHHHHHGGGGGGSC--CCE
T ss_pred             EEEECC---CEEEEEECCCCC--CCC---------CCHHH---------------HHHHHHHHHHHHHHHHHHHC--CCC
T ss_conf             899539---779998457768--744---------53044---------------44345678999987653202--355


Q ss_pred             EEEECCCCCCC---------HHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEE
Q ss_conf             99950047720---------038999999999985896179998642367652465553101389704564671899996
Q gi|254780291|r  372 IILFADDIDRF---------SSIDQKRMFEKFLTQSKISTIFTTRFTSSPESYIKDSTGRPVRVYNINKNSKNEFILLEM  442 (475)
Q Consensus       372 IILN~HD~~~~---------sSi~~KrmFks~itk~nV~AIF~aH~Hqshe~~lec~~GykVPvy~iGSvpkNrF~~lem  442 (475)
                      +++.+|-.+..         ........+...++..++..++.||.|+....      .++.++++.||+..++|..+|+
T Consensus       176 ~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~GH~H~~~~~------~g~~~iv~pGs~~~~~y~~i~~  249 (260)
T 2yvt_A          176 LVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVGKGHEL------VGNTIVVNPGEFEEGRYAFLDL  249 (260)
T ss_dssp             EEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSCCEEEE------ETTEEEEECCBGGGTEEEEEET
T ss_pred             EEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCEEE------ECCEEEEECCCCCCCCEEEEEE
T ss_conf             0578853873224554532220136799999987619979999544688487------5987999899554491799998


Q ss_pred             CCCEEEEEEE
Q ss_conf             4885999998
Q gi|254780291|r  443 TPHYINVTAY  452 (475)
Q Consensus       443 ~~~~atITgY  452 (475)
                      +++.+.+.-|
T Consensus       250 ~~~~~~~~~~  259 (260)
T 2yvt_A          250 TQHKIKLEQF  259 (260)
T ss_dssp             TTTEEEEEEC
T ss_pred             CCCEEEEEEC
T ss_conf             3996999977