HHSEARCH alignment of GI: 254780291 and SCOP domain: d1ii7a_

Alignment

Probab=97.45  E-value=7.4e-05  Score=48.89  Aligned_cols=60  Identities=18%  Similarity=0.276  Sum_probs=41.6

Q ss_pred             HHHHHHHHHHHCCCEEEEEEECCCCCCCCH--HHHHHHHHHH----CCCCCEEECCCCCCCCCCCC
Q ss_conf             468899988611656789760510012126--7788888672----65575130245544478887
Q gi|254780291|r  176 MFVEAINSLKSSKNIILGILTGDMTQSSTT--KELKRFYNIY----SLKFPFFRGLGSQEYIGNRP  235 (475)
Q Consensus       176 ~~vesinsl~~~~~~~~gIINGDLTeFG~q--~qL~eFr~Vw----nl~iPv~lGLGNHDYqNN~d  235 (475)
                      .+.+.+-....++++-+-++.|||.+.+..  ..+..+....    ..++|+|.-.||||+..+..
T Consensus        27 ~~l~~iv~~a~~~~~D~vli~GDlfd~~~~~~~~~~~~~~~~~~l~~~~i~v~~i~GNHD~~~~~~   92 (333)
T d1ii7a_          27 EAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVFAIEGNHDRTQRGP   92 (333)
T ss_dssp             HHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCEEEECCTTTCCSSSC
T ss_pred             HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHH
T ss_conf             999999999987399999987898889979999999999997668753980999678876632204

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: DNA double-strand break repair nuclease
domain: Mre11
species: Archaeon Pyrococcus furiosus [TaxId: 2261]