HHsearch alignment for GI: 254780292 and conserved domain: CHL00159
>CHL00159 rpl13 ribosomal protein L13; Validated.
Probab=100.00 E-value=0 Score=420.57 Aligned_cols=143 Identities=50% Similarity=0.863 Sum_probs=140.7
Q ss_pred CCEEEECCHHHCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCC
Q ss_conf 95113268436020069997898745767999999984656521034556688899975101001560121133331157
Q gi|254780292|r 1 MIPTFFQKSSEVEKKWILVDAKGLIVGRLASQIALRLRGKNKPTYTPSADDGDHVVIINASKVAFSGKKYDQKTYYRHTG 80 (155)
Q Consensus 1 ~~kT~~~k~~~~~r~W~iiDA~~~~lGRlAs~iA~~L~GKhKp~y~P~~d~GD~VvViNa~ki~~tG~K~~~k~y~~htg 80 (155)
T Consensus 1 m~kT~~~~~~~~~r~W~viDA~~~~lGRLAs~iA~~L~GK~Kp~ytP~~d~GD~VVViNa~ki~~TG~K~~~K~y~~htg 80 (143)
T CHL00159 1 MNKTFIPSKNYKKRKWYIIDAKDQKLGRLATEISSLLRGKNKPSYTPSVDTGDYVIVINADKIIVTGNKNTQKFYVRHSG 80 (143)
T ss_pred CCCCCCCCHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECHHEEEECCCCCCEEEEEEEE
T ss_conf 97433188202466689996999944889999999975478773567887799999983714187177300108899876
Q ss_pred CCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHCCCEEEEH
Q ss_conf 5576336302000012487999999997308998547899962701078999713208547616
Q gi|254780292|r 81 YPGGIKKTTAKEILAGASPTNILKKAIARMLPRGPLARKQMKNLHIYAEDHHPHEAQKPVFMDI 144 (155)
Q Consensus 81 ypGG~k~~~~~~~~~~~~P~~il~~aV~gMLPkn~lgr~~lkrL~vy~g~~Hph~aq~P~~l~~ 144 (155)
T Consensus 81 ypGg~k~~~~~~~~-~r~P~~il~~AVkgMLPkn~lgr~~lkrLkVy~G~~Hph~aQ~P~~l~i 143 (143)
T CHL00159 81 RPGGLKVETFKELQ-NRLPNRIIEKAVKGMLPKGPLGRKLFKKLKVYAGSSHPHEAQKPIIINI 143 (143)
T ss_pred CCCCCCCCCHHHHH-HCCCHHHHHHHHHHCCCCCHHHHHHHHCCEEECCCCCCCCCCCCEEECC
T ss_conf 25887565678964-2280579999998618998129999858888698999855689877279