HHsearch alignment for GI: 254780292 and conserved domain: PRK06394

>PRK06394 rpl13p 50S ribosomal protein L13P; Reviewed.
Probab=100.00  E-value=1.4e-41  Score=264.75  Aligned_cols=125  Identities=28%  Similarity=0.381  Sum_probs=113.1

Q ss_pred             EEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHH-HHHHHCCCCCCCCEEEECCCCCC
Q ss_conf             99978987457679999999846565210345566888999751010015601211-33331157557633630200001
Q gi|254780292|r   17 ILVDAKGLIVGRLASQIALRLRGKNKPTYTPSADDGDHVVIINASKVAFSGKKYDQ-KTYYRHTGYPGGIKKTTAKEILA   95 (155)
Q Consensus        17 ~iiDA~~~~lGRlAs~iA~~L~GKhKp~y~P~~d~GD~VvViNa~ki~~tG~K~~~-k~y~~htgypGG~k~~~~~~~~~   95 (155)
T Consensus         2 ivIDA~~~vlGRLAs~vAk~L~g------------Gd~ViVINAeKi~iTG~K~~~~~~Y~~~~~~~~~~~~~~~~~~-~   68 (143)
T PRK06394          2 VVIDAEGAILGRLASYVAKLLLS------------GEEVVIVNAEKAVITGNREFIFEKYKQRRERKTISNPRRFGPY-Y   68 (143)
T ss_pred             EEEECCCCEEHHHHHHHHHHHHC------------CCEEEEEECCCEEEECCHHHHHHHEEEECCCCCCCCCCCCCCC-C
T ss_conf             89978998808899999999858------------9979999761348846537744340453578989886212100-0


Q ss_pred             CCCHHHHHHHHHHHCCC-CCHHHHHHHHCCCCCCCCCCCHHHCCCEEEEHHHCCCCCCCC
Q ss_conf             24879999999973089-985478999627010789997132085476166528131236
Q gi|254780292|r   96 GASPTNILKKAIARMLP-RGPLARKQMKNLHIYAEDHHPHEAQKPVFMDIAKMNPKNSRR  154 (155)
Q Consensus        96 ~~~P~~il~~aV~gMLP-kn~lgr~~lkrL~vy~g~~Hph~aq~P~~l~~~~~~~kn~~~  154 (155)
T Consensus        69 ~r~P~~il~~aVrGMLP~K~~lGr~~~k~LkvY~G~ph~~~aqkp~~~~~a~~~~~~~~k  128 (143)
T PRK06394         69 PKRPDNIVKRTIRGMLPYKKDRGREAFKRLKVYVGVPKELEGKEFETIDDADVSRLSGIK  128 (143)
T ss_pred             CCCHHHHHHHHHHCCCCCCCHHHHHHHHCCEEECCCCCCCCCCCCEECCHHHHHCCCCCC
T ss_conf             029599999988334899985799998498897689986356787505778850648984