PSIBLAST alignment of GI: 254780292 and protein with PDB id: 1pnu
>gi|34811561|pdb|1PNU|H Chain H, Crystal Structure Of A Streptomycin Dependent Ribosome From Escherichia Coli, 50s Subunit Of 70s Ribosome. This File, 1pnu, Contains Only Molecules Of The 50s Ribosomal Subunit. The 30s Subunit, Mrna, P-Site Trna, And A-Site Trna Are In The Pdb File 1pns. Length = 143
>gi|34811614|pdb|1PNY|H Chain H, Crystal Structure Of The Wild Type Ribosome From E. Coli, 50s Subunit Of 70s Ribosome. This File, 1pny, Contains Only Molecules Of The 50s Ribosomal Subunit. The 30s Subunit Is In The Pdb File 1pnx. Length = 143
Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats.
Identities = 64/141 (45%), Positives = 94/141 (66%), Gaps = 3/141 (2%)
Query: 2 IPTFFQKSSEVEKKWILVDAKGLIVGRLASQIALRLRGKNKPTYTPSADDGDHVVIINAS 61
+ T+ K+ E + W++VDA G+ +GRLA+ IA R+RGK++P +TP+ GD VV+INA+
Sbjct: 1 VKTYIPKNDE--QNWVVVDASGVPLGRLATLIASRIRGKHRPDFTPNMIQGDFVVVINAA 58
Query: 62 KVAFSGKKYDQKTYYRHTGYPGGIKKTTAKEILAGASPTNILKKAIARMLPRGPLARKQM 121
+VA +GKK D K Y R+TGY GG+K TA+E L+ P +++ A+ MLP+G R
Sbjct: 59 QVALTGKKLDDKVYTRYTGYQGGLKTETAREALSKH-PERVIEHAVFGMLPKGRQGRAMH 117
Query: 122 KNLHIYAEDHHPHEAQKPVFM 142
L +YA + HPH AQKP +
Sbjct: 118 TRLKVYAGETHPHSAQKPQVL 138