HHsearch alignment for GI: 254780293 and conserved domain: COG0103
>COG0103 RpsI Ribosomal protein S9 [Translation, ribosomal structure and biogenesis].
Probab=100.00 E-value=0 Score=340.17 Aligned_cols=126 Identities=51% Similarity=0.809 Sum_probs=124.7
Q ss_pred CCEEEEECCCEEEEEEEECCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 50013111210899999818973999410088844698999999999987385664107999825983018889999999
Q gi|254780293|r 45 RSYATGKRKTSIARVWIKSGSGKFTINYVDISKYFTQDLLVLNIKRPFNTVSQDNMYDVFATVSGGGLSGQASAICHGVA 124 (170)
Q Consensus 45 ~~~~tGrRKtsvArV~l~~GsG~I~INgk~~~~Yf~~~~~r~~i~~Pl~~~~~~~~~Di~~~V~GGG~sgQa~AirlaIa 124 (170)
T Consensus 5 ~~~~tGkRK~AvArv~l~~g~G~i~vNg~~~e~yf~~e~~r~~i~~Pl~l~~~~~~~Di~v~V~GGG~~GQA~AiR~gIa 84 (130)
T COG0103 5 QVYTTGKRKSAVARVRLVPGKGKITVNGRPLELYFPRETLRMKIMQPLLLTGTVGKFDIDVTVKGGGISGQAGAIRHGIA 84 (130)
T ss_pred EEEEECCCCCEEEEEEEECCCCEEEECCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHH
T ss_conf 24640554326899999768758999891899966409999998766998674245547999966984689999999999
Q ss_pred HHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9997657634487997798335755416759528984335430579
Q gi|254780293|r 125 KALTYFQPDLRPQIKKGGFLTRDSRIVERKKYGKAKARRSFQFSKR 170 (170)
Q Consensus 125 rAL~~~~p~~r~~Lk~~glLt~D~R~~ErKK~G~~kARk~~q~skR 170 (170)
T Consensus 85 RAL~~~~~~lr~~lk~~g~LtrD~R~~ErKK~G~~kARr~~Q~SkR 130 (130)
T COG0103 85 RALVEYDPELRPALKKAGLLTRDPRRVERKKYGLKKARRRPQFSKR 130 (130)
T ss_pred HHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 9999979898999987788015764324443576332115344569