HHsearch alignment for GI: 254780293 and conserved domain: PTZ00086
>PTZ00086 40S ribosomal protein S16; Provisional.
Probab=100.00 E-value=0 Score=321.09 Aligned_cols=127 Identities=29% Similarity=0.402 Sum_probs=116.8
Q ss_pred CCCCEEEEECCCEEEEEEEECCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHC--CCCCEEEEEEEECCCCCHHHHHHH
Q ss_conf 355001311121089999981897399941008884469899999999998738--566410799982598301888999
Q gi|254780293|r 43 WQRSYATGKRKTSIARVWIKSGSGKFTINYVDISKYFTQDLLVLNIKRPFNTVS--QDNMYDVFATVSGGGLSGQASAIC 120 (170)
Q Consensus 43 ~g~~~~tGrRKtsvArV~l~~GsG~I~INgk~~~~Yf~~~~~r~~i~~Pl~~~~--~~~~~Di~~~V~GGG~sgQa~Air 120 (170)
T Consensus 8 ~k~i~~~GrRKtAvArv~l~~G~G~I~IN~k~~~~~~~-~~~~~~i~~Pl~~~~~~~~~~~Di~i~V~GGG~sgQa~Air 86 (147)
T PTZ00086 8 SKQVQTFGKKKTAVAVATVTKGKGLIKVNGVPLDLILP-ETLRAKIMEPLLVVGSKRFSRLDIRVRVRGGGQVAQIYAIR 86 (147)
T ss_pred CCEEEEECCCCCEEEEEEEECCCCEEEECCEEHHHHCC-HHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHH
T ss_conf 71779775474279999998897509998914999689-99999996339774503135510899996787989999999
Q ss_pred HHHHHHHHHH-----CHHHHHHHHHC------CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999999765-----76344879977------98335755416759528984335430579
Q gi|254780293|r 121 HGVAKALTYF-----QPDLRPQIKKG------GFLTRDSRIVERKKYGKAKARRSFQFSKR 170 (170)
Q Consensus 121 laIarAL~~~-----~p~~r~~Lk~~------glLt~D~R~~ErKK~G~~kARk~~q~skR 170 (170)
T Consensus 87 ~aIaRALv~~~~~~~d~~~~~~Lk~~~~~yd~glLtrD~R~~ErKK~G~~kARk~~Q~SkR 147 (147)
T PTZ00086 87 QAIAKGIVAYYQKYVDEAEKAELKDKLLSYDRSLLIADPRRCEPKKFGGHGARARFQKSYR 147 (147)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 9999999986111168667599999986464876346753225476898654636366679