HHsearch results for GI: 254780293 and protein with PDBid: 3ofo_I
>3ofo_I 30S ribosomal protein S9; protein biosynthesis, ribosomes, RNA, tRNA, transfer, eryThr ketolide, macrolide, antibiotic, EXIT, peptidyl; 3.10A {Escherichia coli} PDB: 3fih_I* 3iy8_I 2wwl_I 3ofp_I 2qal_I* 1p6g_I 1p87_I 2aw7_I 2avy_I 2i2u_I 2i2p_I* 2qan_I* 2qb9_I* 2qbb_I* 2qbd_I 2qbf_I 2qbh_I* 2qbj_I* 2qou_I* 2qow_I* ...
Probab=100.00 E-value=0 Score=341.22 Aligned_cols=125 Identities=48% Similarity=0.792 Sum_probs=123.4
Q ss_pred CEEEEECCCEEEEEEEECCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 00131112108999998189739994100888446989999999999873856641079998259830188899999999
Q gi|254780293|r 46 SYATGKRKTSIARVWIKSGSGKFTINYVDISKYFTQDLLVLNIKRPFNTVSQDNMYDVFATVSGGGLSGQASAICHGVAK 125 (170)
Q Consensus 46 ~~~tGrRKtsvArV~l~~GsG~I~INgk~~~~Yf~~~~~r~~i~~Pl~~~~~~~~~Di~~~V~GGG~sgQa~AirlaIar 125 (170)
-|||||||||+|+|||++|+|+|+|||+|+++||+++.+++.+++||.++++.++|||+|+|+|||+||||+||||||||
T Consensus 3 yy~~GrRKtaiArv~l~~G~G~i~IN~~~~~~yf~~~~~~~~~~~Pl~~~~~~~k~di~~~V~GGG~sgQa~Air~aiar 82 (127)
T 3ofo_I 3 YYGTGRRKSSAARVFIKPGNGKIVINQRSLEQYFGRETARMVVRQPLELVDMVEKLDLYITVKGGGISGQAGAIRHGITR 82 (127)
T ss_dssp BCCCCBCSSCEEEEEEESCCSCBCTTSSCTTTTTTTSTTTTTTTTTSSSSCCTTSSEEEEEEESSCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCEEEEEEEEECCEEEEECCEEHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 60206063489999999373389999840899587099999986258874766632489999789766899999999999
Q ss_pred HHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 997657634487997798335755416759528984335430579
Q gi|254780293|r 126 ALTYFQPDLRPQIKKGGFLTRDSRIVERKKYGKAKARRSFQFSKR 170 (170)
Q Consensus 126 AL~~~~p~~r~~Lk~~glLt~D~R~~ErKK~G~~kARk~~q~skR 170 (170)
||+.++|++++.|++.||||+|||++||||||++||||+||||||
T Consensus 83 aL~~~~~~~r~~lk~~glLt~D~R~~ErKK~G~~kARk~~Q~skR 127 (127)
T 3ofo_I 83 ALMEYDESLRSELRKAGFVTRDARQVERKKVGLRKARRRPQFSKR 127 (127)
T ss_dssp HTTSSCTTTTTHHHHTTCSSCCCCCCCCCCTTSSBTTBCCCCCCC
T ss_pred HHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 999979787898987859226764444576898664526255679