PSIBLAST alignment of GI: 254780293 and protein with PDB id: 1vs5
gi|116666556|pdb|1VS5|I Chain I, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. Length = 130
>gi|116666608|pdb|1VS7|I Chain I, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. Length = 130
Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats.
Identities = 60/124 (48%), Positives = 83/124 (66%)
Query: 47 YATGKRKTSIARVWIKSGSGKFTINYVDISKYFTQDLLVLNIKRPFNTVSQDNMYDVFAT 106
Y TG+RK+S ARV+IK G+GK IN + +YF ++ + +++P V D++ T
Sbjct: 7 YGTGRRKSSAARVFIKPGNGKIVINQRSLEQYFGRETARMVVRQPLELVDMVEKLDLYIT 66
Query: 107 VSGGGLSGQASAICHGVAKALTYFQPDLRPQIKKGGFLTRDSRIVERKKYGKAKARRSFQ 166
V GGG+SGQA AI HG+ +AL + LR +++K GF+TRD+R VERKK G KARR Q
Sbjct: 67 VKGGGISGQAGAIRHGITRALMEYDESLRSELRKAGFVTRDARQVERKKVGLRKARRRPQ 126
Query: 167 FSKR 170
FSKR
Sbjct: 127 FSKR 130