RPSBLAST alignment of GI: 254780293 and protein with PDBid: 3ofo
>3ofo_I 30S ribosomal protein S9; protein biosynthesis, ribosomes, RNA, tRNA, transfer, eryThr ketolide, macrolide, antibiotic, EXIT, peptidyl; 3.10A {Escherichia coli} PDB: 3fih_I* 3iy8_I 2wwl_I 3ofp_I 2qal_I* 1p6g_I 1p87_I 2aw7_I 2avy_I 2i2u_I 2i2p_I* 2qan_I* 2qb9_I* 2qbb_I* 2qbd_I 2qbf_I 2qbh_I* 2qbj_I* 2qou_I* 2qow_I* ... Length = 127
Score = 180 bits (459), Expect = 1e-46
Identities = 60/124 (48%), Positives = 83/124 (66%)
Query: 47 YATGKRKTSIARVWIKSGSGKFTINYVDISKYFTQDLLVLNIKRPFNTVSQDNMYDVFAT 106
Y TG+RK+S ARV+IK G+GK IN + +YF ++ + +++P V D++ T
Sbjct: 4 YGTGRRKSSAARVFIKPGNGKIVINQRSLEQYFGRETARMVVRQPLELVDMVEKLDLYIT 63
Query: 107 VSGGGLSGQASAICHGVAKALTYFQPDLRPQIKKGGFLTRDSRIVERKKYGKAKARRSFQ 166
V GGG+SGQA AI HG+ +AL + LR +++K GF+TRD+R VERKK G KARR Q
Sbjct: 64 VKGGGISGQAGAIRHGITRALMEYDESLRSELRKAGFVTRDARQVERKKVGLRKARRRPQ 123
Query: 167 FSKR 170
FSKR
Sbjct: 124 FSKR 127