HHsearch alignment for GI: 254780294 and conserved domain: COG0002
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism].
Probab=100.00 E-value=0 Score=522.15 Aligned_cols=292 Identities=34% Similarity=0.524 Sum_probs=263.9
Q ss_pred CCEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHH--------------------HCCCCEEEECCCCH
Q ss_conf 9079997588678999999986299728999965300786006677--------------------47998999938983
Q gi|254780294|r 1 MYKIFIDGEHGTTGLKIRSRIVQRKDLCLLSIPCEERHNLRYREDL--------------------LNAADVSILCLPDV 60 (311)
Q Consensus 1 M~kVaIvGATG~vG~~li~lL~~hp~~~l~~l~s~~~ag~~~~~~~--------------------~~~~Divf~a~p~~ 60 (311)
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~~g~~~~~~~p~l~g~~~l~~~~~~~~~~~~~~~DvvFlalPhg 81 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAGHPDVELILISSRERAGKPVSDVHPNLRGLVDLPFQTIDPEKIELDECDVVFLALPHG 81 (349)
T ss_pred CCEEEEECCCCCCHHHHHHHHHCCCCEEEEEEECHHHCCCCHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEECCCH
T ss_conf 81599977887748999999865997379996316645870687582423534554335774553015688899906863
Q ss_pred HHHHHHHHHHHCCCCEEEECCCCCHHHH-------------------HHHHHCCCCCCHHHHHHCCCCEEEECCCCCCCC
Q ss_conf 7899999986125848982276303555-------------------431100210004776520496077258421133
Q gi|254780294|r 61 ASLEIIQLIKKNGINSRIIDTSTAHRIA-------------------PGWVYGFPEMDKSQKEKIRSARYITNPGCYATG 121 (311)
Q Consensus 61 ~s~~~~~~~~~~g~~~~vid~ss~~R~~-------------------~~vpl~vPEvN~~~~~~~~~~~iIanPnC~~t~ 121 (311)
T Consensus 82 ~s~~~v~~l~~~g--~~VIDLSadfR~~d~~~ye~~Yg~~h~~~~~l~~avYGLpEl~~---e~i~~A~lIAnPGCypTa 156 (349)
T COG0002 82 VSAELVPELLEAG--CKVIDLSADFRLKDPEVYEKWYGFTHAGPELLEDAVYGLPELHR---EKIRGAKLIANPGCYPTA 156 (349)
T ss_pred HHHHHHHHHHHCC--CEEEECCCCCCCCCHHHHHHHHCCCCCCCHHHHCCCCCCCCCCH---HHHHCCCEEECCCCHHHH
T ss_conf 6889899997479--94998873200577777788627777780133154334731298---888338773679832889
Q ss_pred CHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCC----EE
Q ss_conf 11247888885034556502676512333356100000013444322343322222344444342013321671----13
Q gi|254780294|r 122 AIAILRPLRKAKLLPDRYPITINAVSGYTGGGKKLISRMEQKNMPDTISSNHFFYSLDLLHKHLPEITQYSLIK----TS 197 (311)
Q Consensus 122 ~~laL~PL~~~~~i~~~~~~~~~~~sg~sgaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~e~~~~~~~~----~~ 197 (311)
T Consensus 157 ~iLal~PL~~~~ll~~~~~~ivdakSG~SGaGrk~s~~~~~~e~----~~~~~~Y~~~-~HrH~pEi~q~l~~l~~~~~~ 231 (349)
T COG0002 157 AILALAPLVKAGLLDPDSPPIVDAKSGVSGAGRKASVKNHFPEV----NDSLRPYGLT-GHRHTPEIEQHLGRLAGRKVP 231 (349)
T ss_pred HHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHH----CCCCCCCCCC-CCCCHHHHHHHHHHHCCCCCC
T ss_conf 99988899876997888864899767467678785300255110----3663335445-667659999986010167676
Q ss_pred EEEEEECCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHCCCCEEEEEEEEE
Q ss_conf 68875203433202789999863257754489988665422001443056027878878986427627996079999980
Q gi|254780294|r 198 PMFLPSVGRFPQGIAIQISLDMERLSWKTNSEELHSIFQEYYMGQNIVSVVPLEESRKIKTIACEMMSGNDKLHLFFFDS 277 (311)
Q Consensus 198 ~~~~~~~~~~~~g~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~p~~~~~~g~n~v~Vg~~~~ 277 (311)
T Consensus 232 v~FtPhl~p~~RGIl~Ti~~~l~~---~~t~~~i~~~y~~~Y~~epfVrv~~~~-----~~P~~k~V~GsN~cdIgf~~d 303 (349)
T COG0002 232 VIFTPHLGPFVRGILATIYLKLKD---LVTLEELHAAYEEFYAGEPFVRVVPEG-----GYPDTKAVAGSNFCDIGFAVD 303 (349)
T ss_pred EEEECEECCCCCEEEEEEEEECCC---CCCHHHHHHHHHHHHCCCCEEEECCCC-----CCCCHHHHCCCCCEEEEEEEC
T ss_conf 178520666125089998874188---889999999999986799869970688-----999745515886328988875
Q ss_pred CCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCC
Q ss_conf 899769999972221013689999999987238
Q gi|254780294|r 278 SELPYINIIAVFDNLGKGASGAAIQNMDLLLSS 310 (311)
Q Consensus 278 ~~~~~~~v~s~~DNL~KGAAgnAVQn~nlm~g~ 310 (311)
T Consensus 304 ~~~~rvvvvsaIDNL~KGAAGQAVQnmNim~G~ 336 (349)
T COG0002 304 ERTGRVVVVSAIDNLVKGAAGQAVQNMNIMFGF 336 (349)
T ss_pred CCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCC
T ss_conf 878889999970100234788999999987298