HHsearch alignment for GI: 254780294 and conserved domain: COG1042

Probab=96.11  E-value=0.055  Score=31.52  Aligned_cols=112  Identities=19%  Similarity=0.277  Sum_probs=73.9

Q ss_pred             EEEEECCCC---HHHHHHHHHHHCCCCEEEEEEECCC--CCCCC-CC--HHHHCCCCEEEECCCCHHHHHHHHHHHHCCC
Q ss_conf             799975886---7899999998629972899996530--07860-06--6774799899993898378999999861258
Q gi|254780294|r    3 KIFIDGEHG---TTGLKIRSRIVQRKDLCLLSIPCEE--RHNLR-YR--EDLLNAADVSILCLPDVASLEIIQLIKKNGI   74 (311)
Q Consensus         3 kVaIvGATG---~vG~~li~lL~~hp~~~l~~l~s~~--~ag~~-~~--~~~~~~~Divf~a~p~~~s~~~~~~~~~~g~   74 (311)
T Consensus        12 svavigas~~~~~vg~~i~~nL~~~g~g~i~PVnp~~~~v~G~~ay~s~~~lp~~~dlav~~v~~~~~~~i~~~~~~kGv   91 (598)
T COG1042          12 SIAVIGASERPGKLGYEILRNLLEYGQGKIYPVNPKYDEVLGVKAYTSVADLPDAPDLAVIVVPAKVVPEIVHELGEKGV   91 (598)
T ss_pred             EEEEEECCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCHHHHCCCCCCCEEEEECHHHHHHHHHHHCCCCC
T ss_conf             37887146875215799999998568885574276532336631464075578887706898524456899987200587


Q ss_pred             CEEEECCCCCHHHHHH-HHHCCCCCCHHHHHHCCCCEEEECCCCC
Q ss_conf             4898227630355543-1100210004776520496077258421
Q gi|254780294|r   75 NSRIIDTSTAHRIAPG-WVYGFPEMDKSQKEKIRSARYITNPGCY  118 (311)
Q Consensus        75 ~~~vid~ss~~R~~~~-vpl~vPEvN~~~~~~~~~~~iIanPnC~  118 (311)
T Consensus        92 ~~~i~i-s~gf~e~~~~~~~~e~~~~~~---a~~~~~rligPn~~  132 (598)
T COG1042          92 KGAIVI-SAGFREAGEEGMELEKELVEA---ARKYGMRIIGPNCL  132 (598)
T ss_pred             CEEEEE-CHHHHHHHHHHHHHHHHHHHH---HHHCCCEEECCCCC
T ss_conf             358996-245678877676778899999---88559638623324