HHsearch alignment for GI: 254780294 and conserved domain: COG2910
>COG2910 Putative NADH-flavin reductase [General function prediction only].
Probab=96.80 E-value=0.0089 Score=36.41 Aligned_cols=100 Identities=20% Similarity=0.233 Sum_probs=57.6
Q ss_pred CEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCC-----CCCC--------C--HHHHCCCCEEEECCCCHHHHH--
Q ss_conf 0799975886789999999862997289999653007-----8600--------6--677479989999389837899--
Q gi|254780294|r 2 YKIFIDGEHGTTGLKIRSRIVQRKDLCLLSIPCEERH-----NLRY--------R--EDLLNAADVSILCLPDVASLE-- 64 (311)
Q Consensus 2 ~kVaIvGATG~vG~~li~lL~~hp~~~l~~l~s~~~a-----g~~~--------~--~~~~~~~Divf~a~p~~~s~~-- 64 (311)
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~R-GHeVTAivRn~~K~~~~~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~~~ 79 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKR-GHEVTAIVRNASKLAARQGVTILQKDIFDLTSLASDLAGHDAVISAFGAGASDNDE 79 (211)
T ss_pred CEEEEEECCCHHHHHHHHHHHHC-CCEEEEEEECHHHCCCCCCCEEECCCCCCHHHHHHHHCCCCEEEEECCCCCCCHHH
T ss_conf 90789953745679999999867-98048998076766522353020002227456676635876699721578887157
Q ss_pred --------HHHHHHHCCC-CEEEECCCCCHHHHHHHHHC-CCCCCHHH
Q ss_conf --------9999861258-48982276303555431100-21000477
Q gi|254780294|r 65 --------IIQLIKKNGI-NSRIIDTSTAHRIAPGWVYG-FPEMDKSQ 102 (311)
Q Consensus 65 --------~~~~~~~~g~-~~~vid~ss~~R~~~~vpl~-vPEvN~~~ 102 (311)
T Consensus 80 ~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey 127 (211)
T COG2910 80 LHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEY 127 (211)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCEEECCCCCCHHH
T ss_conf 788899999999861597059998474205876884550589985667