HHsearch alignment for GI: 254780294 and conserved domain: COG3268
>COG3268 Uncharacterized conserved protein [Function unknown].
Probab=95.56 E-value=0.15 Score=28.85 Aligned_cols=142 Identities=15% Similarity=0.131 Sum_probs=86.8
Q ss_pred EEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCC---------CCCC----------CHHHHCCCCEEEECCCC--HH
Q ss_conf 799975886789999999862997289999653007---------8600----------66774799899993898--37
Q gi|254780294|r 3 KIFIDGEHGTTGLKIRSRIVQRKDLCLLSIPCEERH---------NLRY----------REDLLNAADVSILCLPD--VA 61 (311)
Q Consensus 3 kVaIvGATG~vG~~li~lL~~hp~~~l~~l~s~~~a---------g~~~----------~~~~~~~~Divf~a~p~--~~ 61 (311)
T Consensus 8 d~iiYGAtGy~G~lvae~l~~~-g~~~-aLAgRs~~kl~~l~~~LG~~~~~~p~~~p~~~~~~~~~~~VVlncvGPyt~~ 85 (382)
T COG3268 8 DIIIYGATGYAGGLVAEYLARE-GLTA-ALAGRSSAKLDALRASLGPEAAVFPLGVPAALEAMASRTQVVLNCVGPYTRY 85 (382)
T ss_pred EEEEECCCCCHHHHHHHHHHHC-CCCH-HHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCC
T ss_conf 3899746552158999999974-8864-3216888999889985096644467788899999974266899614661202
Q ss_pred HHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCCCHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHCCCC-----
Q ss_conf 899999986125848982276303555431100210004776520496077258421133112478888850345-----
Q gi|254780294|r 62 SLEIIQLIKKNGINSRIIDTSTAHRIAPGWVYGFPEMDKSQKEKIRSARYITNPGCYATGAIAILRPLRKAKLLP----- 136 (311)
Q Consensus 62 s~~~~~~~~~~g~~~~vid~ss~~R~~~~vpl~vPEvN~~~~~~~~~~~iIanPnC~~t~~~laL~PL~~~~~i~----- 136 (311)
T Consensus 86 g~plv~aC~~~GT--dY~DiTGEi~~fe---~~i~~yh~~A--~~~Ga~Ii~~cGFDsIPsDl~v~~l~~~~~~d~~~~~ 158 (382)
T COG3268 86 GEPLVAACAAAGT--DYADITGEIMFFE---NSIDLYHAQA--ADAGARIIPGCGFDSIPSDLGVYALLKQALPDGTEEL 158 (382)
T ss_pred CCHHHHHHHHHCC--CEEECCCCHHHHH---HHHHHHHHHH--HHCCCEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCH
T ss_conf 6479999997198--7241356179999---9988877788--7559789666777767640189999986476444422
Q ss_pred -CC-CCEEEEEECCCCCCC
Q ss_conf -56-502676512333356
Q gi|254780294|r 137 -DR-YPITINAVSGYTGGG 153 (311)
Q Consensus 137 -~~-~~~~~~~~sg~sgaG 153 (311)
T Consensus 159 ~~t~l~l~s~t~~g~S~GT 177 (382)
T COG3268 159 IATHLALGSFTGSGISGGT 177 (382)
T ss_pred HHHHEEEEECCCCCCCCCC
T ss_conf 3321001312567746520