HHsearch alignment for GI: 254780294 and conserved domain: PRK00683

>PRK00683 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.

Probab=94.61  E-value=0.11  Score=29.67  Aligned_cols=73  Identities=11%  Similarity=0.120  Sum_probs=51.4

Q ss_pred             CCEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCC-------CC---CCCHHHHCCCCEEEECCCCHHHHHHHHHHH
Q ss_conf             90799975886789999999862997289999653007-------86---006677479989999389837899999986
Q gi|254780294|r    1 MYKIFIDGEHGTTGLKIRSRIVQRKDLCLLSIPCEERH-------NL---RYREDLLNAADVSILCLPDVASLEIIQLIK   70 (311)
Q Consensus         1 M~kVaIvGATG~vG~~li~lL~~hp~~~l~~l~s~~~a-------g~---~~~~~~~~~~Divf~a~p~~~s~~~~~~~~   70 (311)
T Consensus         3 ~KkvlV~Gl-G~SG~s~a~~L~~~g-~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~SPGi~~~~p~~~~a~   80 (418)
T PRK00683          3 LQRVVVLGL-GVTGKSVARFLAQKG-VYVIGVDNSLEALQSCPYIHERYLEGAEEFPEQVDLVVRSPGIKPYHPWVEAAV   80 (418)
T ss_pred             CCEEEEEEE-CHHHHHHHHHHHHCC-CEEEEECCCHHHHHHCCHHHHHCCCCHHHCCCCCCEEEECCCCCCCCHHHHHHH
T ss_conf             866999808-887999999999782-989998298145454614555405623324234989998998599889999999


Q ss_pred             HCCCC
Q ss_conf             12584
Q gi|254780294|r   71 KNGIN   75 (311)
Q Consensus        71 ~~g~~   75 (311)
T Consensus        81 ~~~i~   85 (418)
T PRK00683         81 ALKIP   85 (418)
T ss_pred             HCCCC
T ss_conf             86997