HHsearch alignment for GI: 254780294 and conserved domain: PRK03806

>PRK03806 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=90.26  E-value=1.3  Score=22.97  Aligned_cols=72  Identities=18%  Similarity=0.202  Sum_probs=51.3

Q ss_pred             CEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCC--------CCC-----CCHHHHCCCCEEEECCCCHHHHHHHHH
Q ss_conf             0799975886789999999862997289999653007--------860-----066774799899993898378999999
Q gi|254780294|r    2 YKIFIDGEHGTTGLKIRSRIVQRKDLCLLSIPCEERH--------NLR-----YREDLLNAADVSILCLPDVASLEIIQL   68 (311)
Q Consensus         2 ~kVaIvGATG~vG~~li~lL~~hp~~~l~~l~s~~~a--------g~~-----~~~~~~~~~Divf~a~p~~~s~~~~~~   68 (311)
T Consensus         7 k~v~V~Gl-G~sG~s~~~~L~~~-G~~v~~~D~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~d~vV~SPGI~~~~p~~~~   84 (438)
T PRK03806          7 KNVVIIGL-GLTGLSCVDFFLAR-GVTPRVMDTRMTPPGLDKLPENVERHTGSLNDEWLLAADLIVASPGIALAHPSLSA   84 (438)
T ss_pred             CEEEEEEE-CHHHHHHHHHHHHC-CCEEEEEECCCCCHHHHHHHCCCCEEECCCCHHHHCCCCEEEECCCCCCCCHHHHH
T ss_conf             98999945-78889999999978-99699998999900578864588466577796680679999989978998989999


Q ss_pred             HHHCCCC
Q ss_conf             8612584
Q gi|254780294|r   69 IKKNGIN   75 (311)
Q Consensus        69 ~~~~g~~   75 (311)
T Consensus        85 a~~~~i~   91 (438)
T PRK03806         85 AADAGVE   91 (438)
T ss_pred             HHHCCCC
T ss_conf             9987994