HHsearch alignment for GI: 254780294 and conserved domain: PRK04663

>PRK04663 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=95.15  E-value=0.1  Score=29.84  Aligned_cols=74  Identities=22%  Similarity=0.312  Sum_probs=50.2

Q ss_pred             CCEEEEECCCCHHHHHHHHHHHCC-CCEEEEEEECCCCC--------CCC-----CCHHHHCCCCEEEECCCCHHHHHHH
Q ss_conf             907999758867899999998629-97289999653007--------860-----0667747998999938983789999
Q gi|254780294|r    1 MYKIFIDGEHGTTGLKIRSRIVQR-KDLCLLSIPCEERH--------NLR-----YREDLLNAADVSILCLPDVASLEII   66 (311)
Q Consensus         1 M~kVaIvGATG~vG~~li~lL~~h-p~~~l~~l~s~~~a--------g~~-----~~~~~~~~~Divf~a~p~~~s~~~~   66 (311)
T Consensus         7 ~KkvlV~Gl-G~sG~s~a~~L~~~~~~~~v~~~D~~~~~~~~~~l~~~~~~~~g~~~~~~l~~~d~vV~SPGI~~~~p~~   85 (438)
T PRK04663          7 IKNVVVVGL-GITGLSVVKHLRKTQPQLTVKVIDTRETPPGQEQLPEDVELHSGGWNQDWLAEADLVVTNPGIALATPEI   85 (438)
T ss_pred             CCEEEEEEE-CHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCEEEECCCCHHHHCCCCEEEECCCCCCCCHHH
T ss_conf             974999906-7858999999996699846999639889368876206976972788967836899999899769989899


Q ss_pred             HHHHHCCCC
Q ss_conf             998612584
Q gi|254780294|r   67 QLIKKNGIN   75 (311)
Q Consensus        67 ~~~~~~g~~   75 (311)
T Consensus        86 ~~a~~~~i~   94 (438)
T PRK04663         86 QPVLAKGIP   94 (438)
T ss_pred             HHHHHCCCC
T ss_conf             999986993