HHsearch alignment for GI: 254780294 and conserved domain: PRK04663
>PRK04663 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=95.15 E-value=0.1 Score=29.84 Aligned_cols=74 Identities=22% Similarity=0.312 Sum_probs=50.2
Q ss_pred CCEEEEECCCCHHHHHHHHHHHCC-CCEEEEEEECCCCC--------CCC-----CCHHHHCCCCEEEECCCCHHHHHHH
Q ss_conf 907999758867899999998629-97289999653007--------860-----0667747998999938983789999
Q gi|254780294|r 1 MYKIFIDGEHGTTGLKIRSRIVQR-KDLCLLSIPCEERH--------NLR-----YREDLLNAADVSILCLPDVASLEII 66 (311)
Q Consensus 1 M~kVaIvGATG~vG~~li~lL~~h-p~~~l~~l~s~~~a--------g~~-----~~~~~~~~~Divf~a~p~~~s~~~~ 66 (311)
T Consensus 7 ~KkvlV~Gl-G~sG~s~a~~L~~~~~~~~v~~~D~~~~~~~~~~l~~~~~~~~g~~~~~~l~~~d~vV~SPGI~~~~p~~ 85 (438)
T PRK04663 7 IKNVVVVGL-GITGLSVVKHLRKTQPQLTVKVIDTRETPPGQEQLPEDVELHSGGWNQDWLAEADLVVTNPGIALATPEI 85 (438)
T ss_pred CCEEEEEEE-CHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCEEEECCCCHHHHCCCCEEEECCCCCCCCHHH
T ss_conf 974999906-7858999999996699846999639889368876206976972788967836899999899769989899
Q ss_pred HHHHHCCCC
Q ss_conf 998612584
Q gi|254780294|r 67 QLIKKNGIN 75 (311)
Q Consensus 67 ~~~~~~g~~ 75 (311)
T Consensus 86 ~~a~~~~i~ 94 (438)
T PRK04663 86 QPVLAKGIP 94 (438)
T ss_pred HHHHHCCCC
T ss_conf 999986993