HHsearch alignment for GI: 254780294 and conserved domain: PRK06392

Probab=93.15  E-value=0.63  Score=24.96  Aligned_cols=79  Identities=20%  Similarity=0.279  Sum_probs=50.4

Q ss_pred             CEEEEECCCCHHHHHHHHHHHCCC-------CEEEEEEECCCC-----CCCC------------C----------CHHHH
Q ss_conf             079997588678999999986299-------728999965300-----7860------------0----------66774
Q gi|254780294|r    2 YKIFIDGEHGTTGLKIRSRIVQRK-------DLCLLSIPCEER-----HNLR------------Y----------REDLL   47 (311)
Q Consensus         2 ~kVaIvGATG~vG~~li~lL~~hp-------~~~l~~l~s~~~-----ag~~------------~----------~~~~~   47 (311)
T Consensus         1 i~I~l~G~-G~VG~~v~~~l~~~~~~~~~~~~i~vv~v~~s~~~~~~~~gid~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (326)
T PRK06392          1 IRISIIGL-GNVGLNVLRIIKSRNDDRRNNNGISVVSVSDSKLSYYNERGLDIGKIISYKEKGRLEEIDYEKIKFDEIFE   79 (326)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHCCCCCCCCHHHHHCCCCCCCCCCCCHHCCCHHHHHC
T ss_conf             97999957-88999999999974999984899379999961010146568898885212232344444200044456645


Q ss_pred             CCCCEEEECCCCH----HHHHHHHHHHHCCCCEEEECCCC
Q ss_conf             7998999938983----78999999861258489822763
Q gi|254780294|r   48 NAADVSILCLPDV----ASLEIIQLIKKNGINSRIIDTST   83 (311)
Q Consensus        48 ~~~Divf~a~p~~----~s~~~~~~~~~~g~~~~vid~ss   83 (311)
T Consensus        80 ~~~dvive~~~~~~~g~~~~~~~~~aL~~Gkh--VVTANK  117 (326)
T PRK06392         80 IKPDVIVDVTPASKDGIREKNLYINAFEHGID--VVTANK  117 (326)
T ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCE--EECCCC
T ss_conf             68987999302775442269999999987996--997796