HHsearch alignment for GI: 254780294 and conserved domain: PRK06813

Probab=94.20  E-value=0.25  Score=27.44  Aligned_cols=78  Identities=17%  Similarity=0.213  Sum_probs=49.4

Q ss_pred             CEEEEECCCCHHHHHHHHHHHCC---------CCEEEEEEECCCC-----CCCCCC----------------H----HH-
Q ss_conf             07999758867899999998629---------9728999965300-----786006----------------6----77-
Q gi|254780294|r    2 YKIFIDGEHGTTGLKIRSRIVQR---------KDLCLLSIPCEER-----HNLRYR----------------E----DL-   46 (311)
Q Consensus         2 ~kVaIvGATG~vG~~li~lL~~h---------p~~~l~~l~s~~~-----ag~~~~----------------~----~~-   46 (311)
T Consensus         3 i~I~l~G~-G~VG~~~~~~l~~~~~~l~~~~g~~l~i~~i~~s~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~   81 (341)
T PRK06813          3 IKVVLSGY-GTVGREFIKLLNEKYLYINETYGIDLVVSGVLGRNVAIHNEDGLSIHHLLRYGGGSAAIEKYIEHHPEERA   81 (341)
T ss_pred             EEEEEECC-CHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHCCCCCCCHHHHHHCCCCCHHHHHHHHHCHHHHH
T ss_conf             02999953-88999999999999999999749977999999686011376688878987503530235555542346663


Q ss_pred             --HCCCCEEEECCC-----CHHHHHHHHHHHHCCCCEEEECCC
Q ss_conf             --479989999389-----837899999986125848982276
Q gi|254780294|r   47 --LNAADVSILCLP-----DVASLEIIQLIKKNGINSRIIDTS   82 (311)
Q Consensus        47 --~~~~Divf~a~p-----~~~s~~~~~~~~~~g~~~~vid~s   82 (311)
T Consensus        82 ~~~~~~~i~vd~t~~~~~~~~~a~~~i~~al~~g~~--VVTAN  122 (341)
T PRK06813         82 TDNISGTVLVESTVTNLKDGNPGKQYIKQAIEKQMD--IVAIS  122 (341)
T ss_pred             CCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCC--EEECC
T ss_conf             035567669991122135764589999999972996--89327