HHsearch alignment for GI: 254780294 and conserved domain: PRK08293

Probab=94.56  E-value=0.35  Score=26.57  Aligned_cols=87  Identities=13%  Similarity=0.190  Sum_probs=57.2

Q ss_pred             CCEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCC------------------CC--------------CCC---HH
Q ss_conf             90799975886789999999862997289999653007------------------86--------------006---67
Q gi|254780294|r    1 MYKIFIDGEHGTTGLKIRSRIVQRKDLCLLSIPCEERH------------------NL--------------RYR---ED   45 (311)
Q Consensus         1 M~kVaIvGATG~vG~~li~lL~~hp~~~l~~l~s~~~a------------------g~--------------~~~---~~   45 (311)
T Consensus         3 i~~VaViGa-G~MG~gIA~~~a~~-G~~V~l~D~~~~~l~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~dl~~   80 (288)
T PRK08293          3 IKKVTVAGA-GVLGSQIAFQTAFK-GFDVTIYDISEEALDAAKRRLAKLADRYVRDLHLTDEAFAAAAKNRITFTTDLAQ   80 (288)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHH
T ss_conf             578999897-88999999999957-9928999898899999999999999999970599917899999807730589899


Q ss_pred             HHCCCCEEEECCCCHHHHH--HHHHHHH-CCCCEEEECCCCCHHHHH
Q ss_conf             7479989999389837899--9999861-258489822763035554
Q gi|254780294|r   46 LLNAADVSILCLPDVASLE--IIQLIKK-NGINSRIIDTSTAHRIAP   89 (311)
Q Consensus        46 ~~~~~Divf~a~p~~~s~~--~~~~~~~-~g~~~~vid~ss~~R~~~   89 (311)
T Consensus        81 a~~~aDlViEav~E~l~iK~~lf~~le~~~~~~~IlaSNTSsl~it~  127 (288)
T PRK08293         81 AVKDADLVIEAVPEDPEIKGDFYEQLAEVAPEKTIFATNSSTLLPSQ  127 (288)
T ss_pred             HHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHH
T ss_conf             84669999997808799999999999974677669986687676579