HHsearch alignment for GI: 254780294 and conserved domain: PRK08328
>PRK08328 hypothetical protein; Provisional.
Probab=90.36 E-value=1.3 Score=23.02 Aligned_cols=96 Identities=18% Similarity=0.218 Sum_probs=58.4
Q ss_pred CEEEEECCCCHHHHHHHHHHHCCCCEEEEE---------------EECCCCCCCC--C----------------------
Q ss_conf 079997588678999999986299728999---------------9653007860--0----------------------
Q gi|254780294|r 2 YKIFIDGEHGTTGLKIRSRIVQRKDLCLLS---------------IPCEERHNLR--Y---------------------- 42 (311)
Q Consensus 2 ~kVaIvGATG~vG~~li~lL~~hp~~~l~~---------------l~s~~~ag~~--~---------------------- 42 (311)
T Consensus 28 s~VlvvG~-GGlGs~~~~~La~~GvG~i~lvD~D~ve~SNLnRQil~~~~diG~~~K~~~a~~~l~~iNp~v~i~~~~~~ 106 (230)
T PRK08328 28 AKVAVVGV-GGLGSPVAYYLAAAGVGTVLLIDEQTPELSNLNRQILHWEEDVGKNPKPISAKWKLERFNSDIKIETFVGR 106 (230)
T ss_pred CCEEEECC-CHHHHHHHHHHHHCCCCEEEEECCCEEECCCCHHHHHCCHHHHCCCCHHHHHHHHHHHHCCCEEEEHHHHH
T ss_conf 97899887-87899999999984898689874878751563255403087747710399999999975995057526644
Q ss_pred -C----HHHHCCCCEEEECCCCHHHHHHHHHHH-HCCCCEEEECCCCCHHHHHHHHHCCCCCCHH
Q ss_conf -6----677479989999389837899999986-1258489822763035554311002100047
Q gi|254780294|r 43 -R----EDLLNAADVSILCLPDVASLEIIQLIK-KNGINSRIIDTSTAHRIAPGWVYGFPEMDKS 101 (311)
Q Consensus 43 -~----~~~~~~~Divf~a~p~~~s~~~~~~~~-~~g~~~~vid~ss~~R~~~~vpl~vPEvN~~ 101 (311)
T Consensus 107 i~~~n~~~ll~~~DlViD~tDn~~tr~~ln~~c~~~~i--PlI~-g~v~g~~Gqv~~~~p~~~~~ 168 (230)
T PRK08328 107 LTEENIDEVLKGVDVIVDCLDNFETRYLLDDYAHKKGI--PLVH-GAVEGMYGQVTTIVPGKTKR 168 (230)
T ss_pred HHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCC--CEEE-EEEECCEEEEEEEECCCCCC
T ss_conf 23777986200598999988998999999999998399--7799-99661799999980899998