HHsearch alignment for GI: 254780294 and conserved domain: PRK09117
>PRK09117 consensus.
Probab=94.76 E-value=0.29 Score=27.02 Aligned_cols=118 Identities=16% Similarity=0.175 Sum_probs=67.5
Q ss_pred CCEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCC---CC--------------CC----------------CHHHH
Q ss_conf 90799975886789999999862997289999653007---86--------------00----------------66774
Q gi|254780294|r 1 MYKIFIDGEHGTTGLKIRSRIVQRKDLCLLSIPCEERH---NL--------------RY----------------REDLL 47 (311)
Q Consensus 1 M~kVaIvGATG~vG~~li~lL~~hp~~~l~~l~s~~~a---g~--------------~~----------------~~~~~ 47 (311)
T Consensus 2 I~~VaViGa-G~mG~~iA~~~a~~-G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~~d~~a~ 79 (282)
T PRK09117 2 IQTVGIIGA-GTMGNGIAQACAVA-GLDVVMVDISDAAVQRGLATVAGSLDRLIKKEKLTEADKAAALARIKGSTDYDAL 79 (282)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHH
T ss_conf 177999897-79999999999967-9968999898899999999999999999970688778899998406567998997
Q ss_pred CCCCEEEECCCCHHHHHH--HHHHHH-CCCCEEEECCCCCHHHHHH--------HHHCCCCCCHHHHHHCCCCEEEECCC
Q ss_conf 799899993898378999--999861-2584898227630355543--------11002100047765204960772584
Q gi|254780294|r 48 NAADVSILCLPDVASLEI--IQLIKK-NGINSRIIDTSTAHRIAPG--------WVYGFPEMDKSQKEKIRSARYITNPG 116 (311)
Q Consensus 48 ~~~Divf~a~p~~~s~~~--~~~~~~-~g~~~~vid~ss~~R~~~~--------vpl~vPEvN~~~~~~~~~~~iIanPn 116 (311)
T Consensus 80 ~~aDlViEav~E~l~iK~~lf~~l~~~~~~~~IlaSNTS~l~i~~ia~~~~~p~R~ig~HffnP~~~~~LVE--iv~g~~ 157 (282)
T PRK09117 80 KDADLVIEAATENLDLKLKILKQLDALVGPDAIIATNTSSISITKLAAATSRPDRFIGMHFFNPVPMMALVE--LIRGLQ 157 (282)
T ss_pred CCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHCCCHHHCCCCCCCCCCCCCCEEE--ECCCCC
T ss_conf 559999987858888889999999865799818986587676177887649846415545568866584488--649999
Q ss_pred CCCCCC
Q ss_conf 211331
Q gi|254780294|r 117 CYATGA 122 (311)
Q Consensus 117 C~~t~~ 122 (311)
T Consensus 158 Ts~~~~ 163 (282)
T PRK09117 158 TSDATH 163 (282)
T ss_pred CCHHHH
T ss_conf 989999