HHsearch alignment for GI: 254780294 and conserved domain: TIGR01777
>TIGR01777 yfcH conserved hypothetical protein TIGR01777; InterPro: IPR010099 This entry represents proteins of unknown function including the Escherichia coli YfcH protein..
Probab=94.94 E-value=0.029 Score=33.27 Aligned_cols=132 Identities=15% Similarity=0.131 Sum_probs=71.1
Q ss_pred EEEECC-CCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHH---H---CCCCEEEECCCCHHHHHHHHHHHHCCCCE
Q ss_conf 999758-8678999999986299728999965300786006677---4---79989999389837899999986125848
Q gi|254780294|r 4 IFIDGE-HGTTGLKIRSRIVQRKDLCLLSIPCEERHNLRYREDL---L---NAADVSILCLPDVASLEIIQLIKKNGINS 76 (311)
Q Consensus 4 VaIvGA-TG~vG~~li~lL~~hp~~~l~~l~s~~~ag~~~~~~~---~---~~~Divf~a~p~~~s~~~~~~~~~~g~~~ 76 (311)
T Consensus 1 ~litGgnTGfiG~~L~~~L~~~-g~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~g~~~~-----~~~-W-~~l--~~~D- 69 (307)
T TIGR01777 1 ILITGGNTGFIGRALTQRLTKS-GHEVTILTRSPQAESNTKKVGYKNWLAEGKLGIVIA-----ESG-W-SAL--EGAD- 69 (307)
T ss_pred CEECCCCCCHHHHHHHHHHHHC-CCEEEEEEECCCCCCCHHCCCCCCCCCCCCCCCCCC-----HHC-C-CCC--CCCC-
T ss_conf 9641533023789999999847-998999961686432000255445555221245207-----220-5-667--8862-
Q ss_pred EEECCCCCHHHH-HHHHHCCCCCCHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCC
Q ss_conf 982276303555-4311002100047765204960772584211331124788888503455650267651233335610
Q gi|254780294|r 77 RIIDTSTAHRIA-PGWVYGFPEMDKSQKEKIRSARYITNPGCYATGAIAILRPLRKAKLLPDRYPITINAVSGYTGGGKK 155 (311)
Q Consensus 77 ~vid~ss~~R~~-~~vpl~vPEvN~~~~~~~~~~~iIanPnC~~t~~~laL~PL~~~~~i~~~~~~~~~~~sg~sgaG~~ 155 (311)
T Consensus 70 aviNLAG~~i~~P~R-------Wt~~~K~~i~~SRi~------~T~---~L~~~i~~~~r~~~~P~~~isaSAvGyYG~~ 133 (307)
T TIGR01777 70 AVINLAGEPIADPKR-------WTEERKQEIRDSRID------TTR---ALVEAIAAAPRAEQKPKVFISASAVGYYGHS 133 (307)
T ss_pred EEEECCCCCCCCCCC-------CCHHHHHHHHHCCHH------HHH---HHHHHHHHCCCCCCCCCEEEEEEEEEEECCC
T ss_conf 798556888577888-------787775756523347------899---9999998465667887168850166630689
Q ss_pred CCHHCCC
Q ss_conf 0000013
Q gi|254780294|r 156 LISRMEQ 162 (311)
Q Consensus 156 ~~~~~~~ 162 (311)
T Consensus 134 ~~~~~tE 140 (307)
T TIGR01777 134 EDRVFTE 140 (307)
T ss_pred CCCEEEC
T ss_conf 9821511