HHsearch alignment for GI: 254780294 and conserved domain: cd05293
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.26 E-value=0.074 Score=30.71 Aligned_cols=34 Identities=21% Similarity=0.268 Sum_probs=27.8
Q ss_pred CEEEEECCCCHHHHHHHHHHHCCC-CEEEEEEECCC
Q ss_conf 079997588678999999986299-72899996530
Q gi|254780294|r 2 YKIFIDGEHGTTGLKIRSRIVQRK-DLCLLSIPCEE 36 (311)
Q Consensus 2 ~kVaIvGATG~vG~~li~lL~~hp-~~~l~~l~s~~ 36 (311)
T Consensus 4 ~Kv~IIGa-G~VG~~~A~~l~~~~l~~el~L~Di~~ 38 (312)
T cd05293 4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVE 38 (312)
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCCEEEEEECCC
T ss_conf 86999897-888999999999669988799993889