HHsearch alignment for GI: 254780294 and conserved domain: pfam05368
>pfam05368 NmrA NmrA-like family. NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.
Probab=97.82 E-value=0.00038 Score=44.93 Aligned_cols=74 Identities=14% Similarity=0.141 Sum_probs=51.5
Q ss_pred EEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCC--CCC-------C-----C-----HHHHCCCCEEEECCCCHH---
Q ss_conf 99975886789999999862997289999653007--860-------0-----6-----677479989999389837---
Q gi|254780294|r 4 IFIDGEHGTTGLKIRSRIVQRKDLCLLSIPCEERH--NLR-------Y-----R-----EDLLNAADVSILCLPDVA--- 61 (311)
Q Consensus 4 VaIvGATG~vG~~li~lL~~hp~~~l~~l~s~~~a--g~~-------~-----~-----~~~~~~~Divf~a~p~~~--- 61 (311)
T Consensus 1 IlV~GatG~iG~~vv~~L~~~-g~~Vr~l~R~~~~~~~~~l~~~gve~v~gD~~d~~sl~~al~gvd~v~~~~~~~~~~~ 79 (232)
T pfam05368 1 ILVFGATGYQGGSVVRASLKA-GHPVRALVRDPKSELAKSLKAAGVELVEGDLDDHESLVEALKGVDVVFSVTGFWLSKE 79 (232)
T ss_pred EEEECCCHHHHHHHHHHHHHC-CCCEEEEECCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCEEEEECCCCCCHH
T ss_conf 099896828999999999858-9938999718736656666417988999068887899999679988999158874177
Q ss_pred ---HHHHHHHHHHCCCCEEE
Q ss_conf ---89999998612584898
Q gi|254780294|r 62 ---SLEIIQLIKKNGINSRI 78 (311)
Q Consensus 62 ---s~~~~~~~~~~g~~~~v 78 (311)
T Consensus 80 ~~~~~~~~~AA~~aGVk~~V 99 (232)
T pfam05368 80 IEDGKKLADAAKEAGVKHFI 99 (232)
T ss_pred HHHHHHHHHHHHHCCCCCEE
T ss_conf 99999999999973998345