HHsearch alignment for GI: 254780294 and conserved domain: smart00859
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=99.96 E-value=1.6e-29 Score=201.93 Aligned_cols=100 Identities=26% Similarity=0.377 Sum_probs=87.6
Q ss_pred EEEEECCCCHHHHHHHHHHHCCCCEEEEEE-ECCCCCCCCCCH-----------------HHHCCCCEEEECCCCHHHHH
Q ss_conf 799975886789999999862997289999-653007860066-----------------77479989999389837899
Q gi|254780294|r 3 KIFIDGEHGTTGLKIRSRIVQRKDLCLLSI-PCEERHNLRYRE-----------------DLLNAADVSILCLPDVASLE 64 (311)
Q Consensus 3 kVaIvGATG~vG~~li~lL~~hp~~~l~~l-~s~~~ag~~~~~-----------------~~~~~~Divf~a~p~~~s~~ 64 (311)
T Consensus 1 kVaIvGatGyvG~eli~lL~~hp~~~~~~l~as~~~~G~~i~~~~~~l~~~~~~~~~~~~~~~~~~Dvvf~a~p~~~s~~ 80 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPHLKGEVVLELEPEDFEELAVDIVFLALPHGVSKE 80 (122)
T ss_pred CEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHCCCCCCCCCCEECCCCCCCCCCCEEEECCCCHHHHH
T ss_conf 98998945199999999998589974577774046589757885966457735056533110017999999388278899
Q ss_pred HHH---HHHHCCCCEEEECCCCCHHHHHHHHHCCCCCCHHHHH
Q ss_conf 999---9861258489822763035554311002100047765
Q gi|254780294|r 65 IIQ---LIKKNGINSRIIDTSTAHRIAPGWVYGFPEMDKSQKE 104 (311)
Q Consensus 65 ~~~---~~~~~g~~~~vid~ss~~R~~~~vpl~vPEvN~~~~~ 104 (311)
T Consensus 81 ~~~~~~~~~~~g--~~VIDlSadfRl~~~~~~~lPEvN~~~i~ 121 (122)
T smart00859 81 IAPLLPKAAEAG--VKVIDLSSAFRMDDDVPYGLPEVNPEAIK 121 (122)
T ss_pred HHHHHHHHHHCC--CEEEECCHHHCCCCCCCEECCCCCHHHHC
T ss_conf 999889887569--87986847752789986699871988954