BLAST/PSIBLAST alignment of GI: 254780295 and GI: 116250203 at iteration 1
>gi|116250203|ref|YP_766041.1| tRNA pseudouridine synthase A [Rhizobium leguminosarum bv. viciae 3841] Length = 272
>gi|115254851|emb|CAK05925.1| putative tRNA pseudouridine synthase [Rhizobium leguminosarum bv. viciae 3841] Length = 272
Score = 325 bits (833), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 150/247 (60%), Positives = 190/247 (76%), Gaps = 1/247 (0%)
Query: 1 MIRYCMIIEYNGSGYFGWQRQKNGSSIQGSIEKAIFLVTGEIVVVHGAGRTDSGVHALRQ 60
M R+ M +EY+G Y GWQRQ+NG S+QG+IE A+ +TGE V V GAGRTDSGVHA+ Q
Sbjct: 1 MPRFRMTVEYDGGPYVGWQRQENGPSVQGAIEAAVLSLTGETVSVRGAGRTDSGVHAMGQ 60
Query: 61 VAHFDLVREWVPVILCKALNAYLKIS-DTISILNLSIVDKQFHARFSAIRRSYLYRIITR 119
V H DL ++W P L ALNA+L+I+ + +S+L++ + F ARFSA+RR YLYRI++R
Sbjct: 61 VIHADLSKDWSPYQLQNALNAHLRIAGERVSVLDVEAAPEFFDARFSALRRHYLYRIVSR 120
Query: 120 QAPLALEKGRAWLIPKSLDCENMRIAAQHLVGRHDFTTFRSIHCQASSPIRTIDHFDVNS 179
+APLALE G+AW +PK LD E M AAQ LVGRHDF+TFR+ HCQA+SP+RT+D DV
Sbjct: 121 RAPLALEAGKAWWVPKVLDHEVMHAAAQRLVGRHDFSTFRAAHCQANSPVRTLDRLDVTR 180
Query: 180 FGNLIEIRVVARSFLHTQIRSFVGSLKLVGDGKWTSTDLEKALQAQDRKECGPLAPPEGL 239
G LIEIR A+SFLH QIRSF G+LKL G+GKWT D+E AL+A+DRK CGP+APP+GL
Sbjct: 181 RGELIEIRATAQSFLHNQIRSFAGTLKLAGEGKWTPDDVEAALKARDRKACGPVAPPDGL 240
Query: 240 YFDSVEY 246
YF V+Y
Sbjct: 241 YFMQVDY 247