BLAST/PSIBLAST alignment of GI: 254780295 and GI: 15964174 at iteration 1
>gi|15964174|ref|NP_384527.1| tRNA pseudouridine synthase A [Sinorhizobium meliloti 1021] Length = 247
>gi|307301319|ref|ZP_07581081.1| tRNA pseudouridine synthase A [Sinorhizobium meliloti BL225C] Length = 247
>gi|30913403|sp|Q92SH4|TRUA_RHIME RecName: Full=tRNA pseudouridine synthase A; AltName: Full=tRNA pseudouridylate synthase I; AltName: Full=tRNA-uridine isomerase I Length = 247
>gi|15073350|emb|CAC41858.1| Probable tRNA pseudouridine synthase A [Sinorhizobium meliloti 1021] Length = 247
>gi|306903775|gb|EFN34362.1| tRNA pseudouridine synthase A [Sinorhizobium meliloti BL225C] Length = 247
 Score =  325 bits (833), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 155/247 (62%), Positives = 187/247 (75%), Gaps = 1/247 (0%)

Query: 1   MIRYCMIIEYNGSGYFGWQRQKNGSSIQGSIEKAIFLVTGEIVVVHGAGRTDSGVHALRQ 60
           M RY + +EY+GS Y GWQRQ NG S+QG+IEKA+  +T E V + GAGRTDSGVHA  Q
Sbjct: 1   MPRYRLTVEYDGSDYVGWQRQDNGPSVQGAIEKAVLSLTRETVSIRGAGRTDSGVHARGQ 60

Query: 61  VAHFDLVREWVPVILCKALNAYLKIS-DTISILNLSIVDKQFHARFSAIRRSYLYRIITR 119
           VAH DL REW    L  ALNA+L ++ + +SIL+++     F ARFSAIRR YLYRII+R
Sbjct: 61  VAHLDLTREWKSYTLQNALNAHLALAGERVSILDVAEAPGDFDARFSAIRRHYLYRIISR 120

Query: 120 QAPLALEKGRAWLIPKSLDCENMRIAAQHLVGRHDFTTFRSIHCQASSPIRTIDHFDVNS 179
           ++PLALE  RAW +PK LD + M  AAQ LVG HDFTTFRS HCQA+SP+RT+D  DV  
Sbjct: 121 RSPLALEARRAWWVPKPLDHDAMHEAAQRLVGHHDFTTFRSAHCQATSPLRTLDRLDVTR 180

Query: 180 FGNLIEIRVVARSFLHTQIRSFVGSLKLVGDGKWTSTDLEKALQAQDRKECGPLAPPEGL 239
            G LIEIR  A+SFLH QIRSF GSLKLVG+GKWT  DL+ AL+A+DRK CGP+APP+GL
Sbjct: 181 AGELIEIRATAQSFLHNQIRSFAGSLKLVGEGKWTPDDLQAALEARDRKACGPVAPPDGL 240

Query: 240 YFDSVEY 246
           YF  V+Y
Sbjct: 241 YFMRVDY 247