BLAST/PSIBLAST alignment of GI: 254780295 and GI: 222084710 at iteration 1
>gi|222084710|ref|YP_002543239.1| tRNA pseudouridine synthase A [Agrobacterium radiobacter K84] Length = 266
>gi|221722158|gb|ACM25314.1| tRNA pseudouridine synthase A [Agrobacterium radiobacter K84] Length = 266
 Score =  333 bits (853), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 157/247 (63%), Positives = 188/247 (76%), Gaps = 1/247 (0%)

Query: 1   MIRYCMIIEYNGSGYFGWQRQKNGSSIQGSIEKAIFLVTGEIVVVHGAGRTDSGVHALRQ 60
           M RY M +EY+G  Y GWQRQ NG S+QG+IE+AI  +TGE   V GAGRTDSGVHA+ Q
Sbjct: 2   MPRYRMTVEYDGIPYVGWQRQNNGPSVQGAIERAILSLTGETASVRGAGRTDSGVHAVGQ 61

Query: 61  VAHFDLVREWVPVILCKALNAYLKIS-DTISILNLSIVDKQFHARFSAIRRSYLYRIITR 119
           V H DL +EW P  L  ALNA+L+++ D ++ILN+  VD  F ARFSAIRR YLYRII R
Sbjct: 62  VTHADLSKEWKPHTLRNALNAHLRLAGDRVAILNVMEVDASFDARFSAIRRHYLYRIIVR 121

Query: 120 QAPLALEKGRAWLIPKSLDCENMRIAAQHLVGRHDFTTFRSIHCQASSPIRTIDHFDVNS 179
           +APLALE GRAW + K +D E M  AAQ LVGRHDFTTFRS+HCQA+SP+RT+D  DV  
Sbjct: 122 RAPLALEAGRAWWVAKDMDHEVMHTAAQTLVGRHDFTTFRSVHCQANSPVRTLDRLDVTR 181

Query: 180 FGNLIEIRVVARSFLHTQIRSFVGSLKLVGDGKWTSTDLEKALQAQDRKECGPLAPPEGL 239
            G LIEIR  A+SFLH QIRSF G+LKL G+GKWT  D+  AL+A+DRK CGP+APP+GL
Sbjct: 182 SGELIEIRATAQSFLHNQIRSFAGTLKLAGEGKWTPDDVRTALEARDRKACGPVAPPDGL 241

Query: 240 YFDSVEY 246
           YF  V+Y
Sbjct: 242 YFMQVDY 248