RPSBLAST alignment for GI: 254780295 and conserved domain: pfam01416
>gnl|CDD|144857 pfam01416, PseudoU_synth_1, tRNA pseudouridine synthase. Involved in the formation of pseudouridine at the anticodon stem and loop of transfer-RNAs Pseudouridine is an isomer of uridine (5-(beta-D-ribofuranosyl) uracil, and id the most abundant modified nucleoside found in all cellular RNAs. The TruA-like proteins also exhibit a conserved sequence with a strictly conserved aspartic acid, likely involved in catalysis. Length = 103
Score = 90.2 bits (224), Expect = 5e-19
Identities = 33/103 (32%), Positives = 45/103 (43%)
Query: 145 AAQHLVGRHDFTTFRSIHCQASSPIRTIDHFDVNSFGNLIEIRVVARSFLHTQIRSFVGS 204
AA+ G HDF+ F+ S IRTI+ + G L + FL+ Q+R VG+
Sbjct: 1 AAKLYDGTHDFSGFQKQRTVQKSLIRTIEKIGIERDGELYVFEIKGNGFLYHQVRIMVGA 60
Query: 205 LKLVGDGKWTSTDLEKALQAQDRKECGPLAPPEGLYFDSVEYS 247
L G G + L ++ R P AP GLY V Y
Sbjct: 61 LLRTGKGVHALEQVVSLLNSKLRPPAPPTAPAVGLYLFHVRYD 103