RPSBLAST alignment for GI: 254780295 and conserved domain: cd02569

>gnl|CDD|30019 cd02569, PseudoU_synth_ScPus3, PseudoU_synth_ScPus3-like: Pseudouridine synthase, Saccharomyces cerevisiae Pus3 like. This group consists of eukaryotic pseudouridine synthases similar to S. cerevisiae Pus3p, mouse Pus3p and, human PUS2. Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi). No cofactors are required. S. cerevisiae Pus3p makes psi38 and psi39 in tRNAs. Mouse Pus3p has been shown to makes psi38 and, possibly also psi 39, in tRNAs. Psi38 and psi39 are highly conserved in tRNAs from eubacteria, archea and eukarya.. Length = 256
 Score = 86.8 bits (215), Expect = 5e-18
 Identities = 59/236 (25%), Positives = 90/236 (38%), Gaps = 49/236 (20%)

Query: 8   IEYNGSGYFGWQRQKNG-SSIQGSIEKAI----FLVTGEIVVVHGAGRTDSGVHALRQVA 62
             Y G  Y G+  Q+   ++++ ++ +A+     +   +       GRTD GV A  QV 
Sbjct: 3   FAYLGWNYNGFAVQEETTNTVEETLFEALEKTRLIEDRQTSNYSRCGRTDKGVSAFGQVI 62

Query: 63  HFDL--------------VREWV----PVILCKALNAYLKISDTISILNLSIVDKQFHAR 104
             D+                +       +  CK LN  L     I IL  + V   F AR
Sbjct: 63  SLDVRSNLKPEDGLDPSTDVKSTADEEELPYCKILNRVL--PPDIRILAWAPVPPDFSAR 120

Query: 105 FSAIRRSYLYRIITRQAPLALEKGRAWLIPKSLDCENMRIAAQHLVGRHDFTTFRSI--H 162
           FS + R+Y Y                +     LD E MR AA+ L+G HDF  F  +   
Sbjct: 121 FSCVSRTYRY----------------FFPKGDLDIELMRKAAKLLLGEHDFRNFCKMDVA 164

Query: 163 CQASSPIRTIDHFDVNSFGN------LIEIRVVARSFLHTQIRSFVGSLKLVGDGK 212
            Q ++ +R +   +V           L    V   +FL  Q+R  +  L L+G G 
Sbjct: 165 NQVTNYVRRVLSAEVEPVDQHPDGDGLYYFEVRGSAFLWHQVRCMMAVLFLIGQGL 220