RPSBLAST alignment for GI: 254780295 and conserved domain: cd02570

>gnl|CDD|30020 cd02570, PseudoU_synth_EcTruA, PseudoU_synth_EcTruA: Pseudouridine synthase, Escherichia coli TruA like. This group consists of eukaryotic and bacterial pseudouridine synthases similar to E. coli TruA, Pseudomonas aeruginosa truA and human pseudouridine synthase-like 1 (PUSL1). Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi). No cofactors are required. E. coli TruA makes psi38/39 and/or 40 in tRNA. psi38 and psi39 in tRNAs are highly phylogenetically conserved. P. aeruginosa truA is required for induction of type III secretory genes and may act through modifying tRNAs critical for the expression of type III genes or their regulators.. Length = 239
 Score =  310 bits (797), Expect = 2e-85
 Identities = 113/241 (46%), Positives = 151/241 (62%), Gaps = 2/241 (0%)

Query: 6   MIIEYNGSGYFGWQRQKNGSSIQGSIEKAIFLVTGEIVVVHGAGRTDSGVHALRQVAHFD 65
           + IEY+G+ + GWQRQ NG ++QG +EKA+  + GE V V GAGRTD+GVHAL QVAHFD
Sbjct: 1   LTIEYDGTNFSGWQRQPNGRTVQGELEKALSKIAGEPVRVIGAGRTDAGVHALGQVAHFD 60

Query: 66  LVREWVPVILCKALNAYLKISDTISILNLSIVDKQFHARFSAIRRSYLYRIITRQAPLAL 125
              E     L KALN+ L     I +L+   V   FHARFSA  R+Y YRI+ R  P   
Sbjct: 61  TPSEIPLEKLIKALNSLLP--PDIRVLSAEEVPDDFHARFSAKSRTYRYRILNRPVPSPF 118

Query: 126 EKGRAWLIPKSLDCENMRIAAQHLVGRHDFTTFRSIHCQASSPIRTIDHFDVNSFGNLIE 185
            +   W +P+ LD E M+ AA+ L+G HDF++FR+  CQ+ S +RTI   DV   G+LI 
Sbjct: 119 LRRYVWHVPRPLDIEAMQEAAKLLLGTHDFSSFRAAGCQSKSTVRTIYRADVYREGDLIV 178

Query: 186 IRVVARSFLHTQIRSFVGSLKLVGDGKWTSTDLEKALQAQDRKECGPLAPPEGLYFDSVE 245
             + A  FL+  +R+ VG+L  VG GK +  D+++ L+A+DR   GP AP  GLY   VE
Sbjct: 179 FEIRANGFLYHMVRNIVGTLLEVGRGKLSPEDIKEILEAKDRTAAGPTAPAHGLYLVKVE 238

Query: 246 Y 246
           Y
Sbjct: 239 Y 239