RPSBLAST alignment for GI: 254780295 and conserved domain: KOG2553

>gnl|CDD|37764 KOG2553, KOG2553, KOG2553, Pseudouridylate synthase [Translation, ribosomal structure and biogenesis]. Length = 416

 Score = 81.9 bits (202), Expect = 1e-16
 Identities = 63/299 (21%), Positives = 106/299 (35%), Gaps = 59/299 (19%)

Query: 2   IRYCMIIEYNGSGYFGWQRQKNGSSIQGSIEKAIFLVTGEIVVVHG----------AGRT 51
            +  +++ Y G+GY G Q      +I+G + +A+F   G I   +           A RT
Sbjct: 37  RKVAILLGYCGTGYHGMQYNPPLKTIEGELFEALFKA-GAISESNAGDPKKIGFARAART 95

Query: 52  DSGVHALRQVAHFDLVREWVPVILCKALNAYLKISDTISILNLSIVDKQFHARFSAIRRS 111
           D GVHA   V    L  +     L + LN  L   + I +  +  V K F+ R     R+
Sbjct: 96  DKGVHAAGNVISLKLELD--DPELVEKLNEIL--PEQIRVWGVKRVTKSFNPRKQCDSRT 151

Query: 112 YLY-------------RIITRQAPLALEKG------------RAWLIPKSLDCENMRIAA 146
           Y Y              ++        E                            R++ 
Sbjct: 152 YEYLLPTFALAPPKPSSLLEVDIQYDKEFEKEFWNTYPLSAKERLSGQDRKTESGYRLSE 211

Query: 147 QHL----------VGRHDFTTFRSIHCQAS-SPIRTIDHFDVNSFGNL-------IEIRV 188
           + L          VG H+F  F +       S  R I  F V+    +       ++I++
Sbjct: 212 EKLEVFNTILSKYVGTHNFHNFTTGKDFTDPSSNRFIKSFTVSEPFVINDEGVEFVKIKI 271

Query: 189 VARSFLHTQIRSFVGSLKLVGDGKWTSTDLEKALQAQDRKECGPLAPPEGLYFDSVEYS 247
             +SF+  QIR  VG   L+      ++ +++A   + +    P AP EGL  +   + 
Sbjct: 272 HGQSFMLHQIRKMVGLAVLIVRSGAPASTIQRAFNKEHKINI-PKAPGEGLLLEEPHFE 329