RPSBLAST alignment for GI: 254780295 and conserved domain: KOG2554

>gnl|CDD|37765 KOG2554, KOG2554, KOG2554, Pseudouridylate synthase [Translation, ribosomal structure and biogenesis]. Length = 425
 Score = 88.1 bits (218), Expect = 2e-18
 Identities = 65/263 (24%), Positives = 96/263 (36%), Gaps = 56/263 (21%)

Query: 15  YFGW-------QRQKNGSSIQGSIEKAIF---LVTG-EIVVVHGAGRTDSGVHALRQVAH 63
           Y GW       Q   N  +I+G + +A+    L+   +       GRTD GV A  QV  
Sbjct: 74  YLGWNYQGLAPQEHTNNPTIEGKLFEALKKTRLIESRQTCNYSRCGRTDKGVSAFGQVIS 133

Query: 64  FDLV---------REWVP------VILCKALNAYLKISDTISILNLSIVDKQFHARFSAI 108
             L          R+ V       +     LN  L     I I+  + V   F ARFS +
Sbjct: 134 LVLRSRIPMPDSQRDAVATADSEEIPYVHMLNRVL--PPDIRIVAWAPVPPTFSARFSCV 191

Query: 109 RRSYLYRIITRQAPLALEKGRAWLIPKSLDCENMRIAAQHLVGRHDFTTF--RSIHCQAS 166
           +R+Y Y                +   K LD + M  AA  LVG HDF  F    +    +
Sbjct: 192 QRTYRY----------------YFPKKDLDIDRMSKAASLLVGEHDFRNFCKIDVSNGVT 235

Query: 167 SPIRTIDH---FDVNSFGNLIEIRVVARSFLHTQIRSFVGSLKLVGDGKWTSTDLEKALQ 223
           +  RTI      DV     +  + +   +FL  Q+R  +  L L+G G            
Sbjct: 236 NYERTILSAKVEDVGQTPGMYYLDIQGSAFLWHQVRCIMAILFLIGQGL---EQPSLISD 292

Query: 224 AQDRKECGPLAPPEGLYFDSVEY 246
             D ++     P +  Y  + +Y
Sbjct: 293 LLDIEK----NPQKPQYTMASDY 311