HHsearch alignment for GI: 254780297 and conserved domain: PRK12846
>PRK12846 peptide deformylase; Reviewed.
Probab=100.00 E-value=0 Score=408.32 Aligned_cols=165 Identities=41% Similarity=0.637 Sum_probs=157.6
Q ss_pred CCCCCHHHCCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCCEEEEECCCCCCCCCCCEECCCC
Q ss_conf 9877364576931052121378788-899999999998650047642130220144000377316432334821001644
Q gi|254780297|r 1 MVKKPLVIFPDPILRRVSRPIEKIN-SDIMNLIDNMLEVMYSTDGIGLAAVQIGVLYRLVVIDLQDHAHRKNPMVFINPK 79 (170)
Q Consensus 1 M~~~~Iv~~~dp~L~~~~~~v~~~~-~~~~~li~dm~~tm~~~~GvGLAA~QIG~~~ri~vv~~~~~~~~~~~~~~iNP~ 79 (170)
T Consensus 1 Mai~~Iv~~pdp~Lr~~a~~V~~~d~~~l~~li~dM~~tM~~~~GvGLAApQIG~~~ri~vi~~~~~~--~~~~v~INP~ 78 (168)
T PRK12846 1 MAIRPILKMPDPRLLTPAEPVTAFDSPELQALIDDMFETMRAANGVGLAAPQIGVSLRVVVFGLGDDA--VPRTVLINPV 78 (168)
T ss_pred CCCCCCCCCCCHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEHHHCCCCEEEEEEECCCCC--CCCEEEECCE
T ss_conf 98344002799799380627886893999999999999998789959885566974139999758877--7828999984
Q ss_pred CCCHHHHHHHHHHHCCCCCCCCHHHHHCCHHEEEEECCCCCEEEEEEECCEEEEEEEEHHHHCCEEEEEECCHHHHHHHH
Q ss_conf 20100000111000001223210121100000246323585579997297646432700131976853647889999999
Q gi|254780297|r 80 IITFSDDFSVYQEGCLSIPDYRADVKRSAFITVRYMDCNAQHQIIYADGLLATCLQHELDHLNGILFIDHLSRLKRDMIT 159 (170)
Q Consensus 80 I~~~s~e~~~~~EGCLS~Pg~~~~V~R~~~I~v~~~d~~G~~~~~~~~g~~Ar~~QHEiDHL~G~lf~drls~~kr~~~~ 159 (170)
T Consensus 79 I~~~s~~~~~~~EGCLS~Pg~~~~V~R~~~I~v~~~d~~G~~~~~~~~g~~Ar~iQHE~DHL~G~Lf~Drls~~kr~~~~ 158 (168)
T PRK12846 79 IEPESPEMEEGWEGCLSVPGLRGEVERYARVRVRGQDLDGKPIEREAEGFLARCVQHEIDHLDGILYPSRLSRLKRFGFL 158 (168)
T ss_pred EECCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCEEEEEEHHHHCCCCEEHHHHCCHHHHHHHH
T ss_conf 76478966973067105799777788754999999868998999999772241306273751989606718999999999
Q ss_pred HHHHHHHH
Q ss_conf 99999985
Q gi|254780297|r 160 KKMSKLVQ 167 (170)
Q Consensus 160 ~k~~k~~k 167 (170)
T Consensus 159 kk~~K~l~ 166 (168)
T PRK12846 159 EVLEKGLD 166 (168)
T ss_pred HHHHHCCC
T ss_conf 99865128