HHsearch alignment of GI: 254780297 and MMDB domain: 1v3y_A_1-156
>1v3y_A (A:1-156) Peptide deformylase; protein synthesis, riken structural genomics/proteomics initiative, RSGI, structural genomics, hydrolase; 1.81A {Thermus thermophilus}
Probab=100.00 E-value=0 Score=332.31 Aligned_cols=144 Identities=38% Similarity=0.614 Sum_probs=131.3
Q ss_pred CCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCCEEEEECCCCCC-----------CC
Q ss_conf 8773645769310521213787888999999999986500476421302201440003773164323-----------34
Q gi|254780297|r 2 VKKPLVIFPDPILRRVSRPIEKINSDIMNLIDNMLEVMYSTDGIGLAAVQIGVLYRLVVIDLQDHAH-----------RK 70 (170)
Q Consensus 2 ~~~~Iv~~~dp~L~~~~~~v~~~~~~~~~li~dm~~tm~~~~GvGLAA~QIG~~~ri~vv~~~~~~~-----------~~ 70 (170)
|+++|++||||+||++|+||+.+ +++++++++|++||++.+|+||||||||+++|+|+++.++... ..
T Consensus 1 mi~~Iv~~~~p~Lr~~a~~V~~~-~~~~~li~~m~~tm~~~~gvGLAApQIG~~~ri~vi~~~~~~~~~~~~~~~~~~~~ 79 (156)
T 1v3y_A 1 MVYPIRLYGDPVLRRKARPVEDF-SGIKRLAEDMLETMFEAKGVGLAAPQIGLSQRLFVAVEYADEPEGEEERPLRELVR 79 (156)
T ss_dssp CCCCCCCTTCGGGGSCCBCCCCC-TTHHHHHHHHHHHHHHTTCSEEEGGGGTCCBSEEEEEC------------CTTTCS
T ss_pred CCCCCCCCCCHHHHCCCEECCCC-HHHHHHHHHHHHHHHHHHHCCCCCEECCEEEEEEEEEECCCCCHHHHHHHHCCCCC
T ss_conf 91661418996895727346884-36999999999999986425854204254346899984055730455432102467
Q ss_pred CCCEECCCCCCCHHHHHHHHHHHCCCCCCCC-HHHHHCCHHEEEEECCCCCEEEEEEECCEEEEEEEEHHHHCCEEEE
Q ss_conf 8210016442010000011100000122321-0121100000246323585579997297646432700131976853
Q gi|254780297|r 71 NPMVFINPKIITFSDDFSVYQEGCLSIPDYR-ADVKRSAFITVRYMDCNAQHQIIYADGLLATCLQHELDHLNGILFI 147 (170)
Q Consensus 71 ~~~~~iNP~I~~~s~e~~~~~EGCLS~Pg~~-~~V~R~~~I~v~~~d~~G~~~~~~~~g~~Ar~~QHEiDHL~G~lf~ 147 (170)
.+.+||||+|+..|+ ...++|||||+||.+ +.|+||.+|+|+|+|++|++++.+++||+|||+|||+|||||+||+
T Consensus 80 ~~~v~INP~I~~~~~-~~~~~EgClS~p~~~~~~V~R~~~I~v~y~d~~g~~~~~~~~g~~Ar~~QHEiDHL~G~l~i 156 (156)
T 1v3y_A 80 RVYVVANPVITYREG-LVEGTEGXLSLPGLYSEEVPRAERIRVEYQDEEGRGRVLELEGYMARVFQHEIDHLDGILFF 156 (156)
T ss_dssp CEEEEEEEEEEEEEC-CEEEEECCTTSTTCCEEEEEECSEEEEEEECTTSCEEEEEEEHHHHHHHHHHHHHHTTCCGG
T ss_pred CEEEEECCEEEEECC-EEECCCCCCCCCCCCEEEEECCCEEEEEEEECCCCEEEEEEECEEEEEEEHHHHCCCCEEEH
T ss_conf 339986989998311-34135777788986125876567899999963795689997050430103164722889734