HHsearch alignment of GI: 254780297 and MMDB domain: 1y6h_A_
>1y6h_A (A:) Peptide deformylase; open and close conformation, PDF, hydrolase; 2.20A {Leptospira interrogans}
Probab=100.00 E-value=0 Score=377.22 Aligned_cols=167 Identities=33% Similarity=0.555 Sum_probs=157.8
Q ss_pred CCCCHHHCCCCCCCCCCCCCCC---CCHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCCEEEEECCCCCCC-----CCCC
Q ss_conf 8773645769310521213787---8889999999999865004764213022014400037731643233-----4821
Q gi|254780297|r 2 VKKPLVIFPDPILRRVSRPIEK---INSDIMNLIDNMLEVMYSTDGIGLAAVQIGVLYRLVVIDLQDHAHR-----KNPM 73 (170)
Q Consensus 2 ~~~~Iv~~~dp~L~~~~~~v~~---~~~~~~~li~dm~~tm~~~~GvGLAA~QIG~~~ri~vv~~~~~~~~-----~~~~ 73 (170)
|+++|++||||+||++|+||+. +++++++++++|.+||++++|+||||||||+++|+|+++.++.... ..+.
T Consensus 1 ai~~I~~~~dp~Lr~~~~~V~~~d~~~~~i~~li~~m~~tm~~~~gvGLAApQIG~~~ri~vi~~~~~~~~~~~~~~~~~ 80 (177)
T 1y6h_A 1 SVRKILRMGDPILRKISEPVTEDEIQTKEFKKLIRDMFDTMRHAEGVGLAAPQIGILKQIVVVGSEDNERYPGTPDVPER 80 (177)
T ss_dssp CCCCCCCTTCGGGGSCCBCCCGGGTTSHHHHHHHHHHHHHHHHTTCSEEEGGGGTCCBSEEEECCSSCTTSTTSCCCCCE
T ss_pred CCCCHHCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEEEEEEEECCCCCCCCCCCCCCEE
T ss_conf 95722028987996137007831248899999999999999872754520033101152899724755456666543304
Q ss_pred EECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHCCHHEEEEECCCCCEEEEEEECCEEEEEEEEHHHHCCEEEEEECCHH
Q ss_conf 00164420100000111000001223210121100000246323585579997297646432700131976853647889
Q gi|254780297|r 74 VFINPKIITFSDDFSVYQEGCLSIPDYRADVKRSAFITVRYMDCNAQHQIIYADGLLATCLQHELDHLNGILFIDHLSRL 153 (170)
Q Consensus 74 ~~iNP~I~~~s~e~~~~~EGCLS~Pg~~~~V~R~~~I~v~~~d~~G~~~~~~~~g~~Ar~~QHEiDHL~G~lf~drls~~ 153 (170)
+||||+|++.|+++..++|||||+||+++.|.||.+|+|+|+|++|++++.+++||+|||+|||+|||+|++|+||+++.
T Consensus 81 vliNP~I~~~s~~~~~~~EgClS~pg~~~~V~R~~~I~v~~~d~~G~~~~~~~~G~~Ar~~QHEiDHL~G~l~~Drl~~~ 160 (177)
T 1y6h_A 81 IILNPVITPLTKDTSGFWEGCLSVPGMRGYVERPNQIRMQWMDEKGNQFDETIDGYKAIVYQHECDHLQGILYVDRLKDT 160 (177)
T ss_dssp EEEEEEEEECCSCEEEEEEEETTEEEEEEEEEEESEEEEEEECTTCCEEEEEEEHHHHHHHHHHHHHHTTCCGGGGBSCT
T ss_pred EECCEEEEEECCCEEEEECCCCCCCCCEEEEEEEEEEEEEECCHHHHCCCEEECHHHHHHHHHHHHHHCCCCCHHHCCHH
T ss_conf 64041898732515787205777798302432340123575665440554186738899999978972899006622843
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999999850
Q gi|254780297|r 154 KRDMITKKMSKLVQL 168 (170)
Q Consensus 154 kr~~~~~k~~k~~k~ 168 (170)
++..+.++++++.+.
T Consensus 161 ~~~~~~~~~~~~~~~ 175 (177)
T 1y6h_A 161 KLFGFNETLDSSHNV 175 (177)
T ss_dssp TSEEEHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHH
T ss_conf 366789999987751