HHsearch alignment of GI: 254780297 and MMDB domain: 1zxz_A_

>1zxz_A (A:) PDF, peptide deformylase, mitochondrial; PDF1A, eukaryote, higher plant, zinc ION, hydrolase; 2.80A {Arabidopsis thaliana} PDB: 1zy0_A 1zy1_A
Probab=100.00  E-value=0  Score=380.68  Aligned_cols=169  Identities=31%  Similarity=0.452  Sum_probs=157.2

Q ss_pred             CCCCCHHHCCCCCCCCCCCCCCC---CCHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCCEEEEECCCCCC---------
Q ss_conf             98773645769310521213787---888999999999986500476421302201440003773164323---------
Q gi|254780297|r    1 MVKKPLVIFPDPILRRVSRPIEK---INSDIMNLIDNMLEVMYSTDGIGLAAVQIGVLYRLVVIDLQDHAH---------   68 (170)
Q Consensus         1 M~~~~Iv~~~dp~L~~~~~~v~~---~~~~~~~li~dm~~tm~~~~GvGLAA~QIG~~~ri~vv~~~~~~~---------   68 (170)
                      |++++|++||||+||++|+||+.   +++++++++++|++||++++||||||||||+++|+|||++++...         
T Consensus         1 M~i~~Iv~~~~p~Lr~~~~pV~~~~~~~~~~~~li~~M~~tm~~~~gvGLAApQIG~~~ri~vi~~~~~~~~~~~~~~~~   80 (197)
T 1zxz_A            1 MDLPEIVASGDPVLHEKAREVDPGEIGSERIQKIIDDMIKVMRLAPGVGLAAPQIGVPLRIIVLEDTKEYISYAPKEEIL   80 (197)
T ss_dssp             -CCCCCCCTTSGGGTSCCBCCCTTTTTSHHHHHHHHHHHHHHHHTTCSEEEGGGGTCCBSEEEEEECHHHHHSSCHHHHH
T ss_pred             CCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCHHHH
T ss_conf             97054141899788356732796567879999999999999987587550100553327799998774224558502222


Q ss_pred             -----CCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHCCHHEEEEECCCCCEEEEEEECCEEEEEEEEHHHHCC
Q ss_conf             -----348210016442010000011100000122321012110000024632358557999729764643270013197
Q gi|254780297|r   69 -----RKNPMVFINPKIITFSDDFSVYQEGCLSIPDYRADVKRSAFITVRYMDCNAQHQIIYADGLLATCLQHELDHLNG  143 (170)
Q Consensus        69 -----~~~~~~~iNP~I~~~s~e~~~~~EGCLS~Pg~~~~V~R~~~I~v~~~d~~G~~~~~~~~g~~Ar~~QHEiDHL~G  143 (170)
                           ...+.++|||+|++.|+++..+||||||+||+++.|+||.+|+|+|+|++|++++.+++||+|||+|||+|||+|
T Consensus        81 ~~~~~~~~~~vlINP~i~~~s~~~~~~~EGCLSvp~~~~~V~R~~~I~v~~~d~~G~~~~~~~~G~~Ar~~QHEiDHL~G  160 (197)
T 1zxz_A           81 AQERRHFDLMVMVNPVLKERSNKKALFFEGCLSVDGFRAAVERYLEVVVTGYDRQGKRIEVNASGWQARILQHECDHLDG  160 (197)
T ss_dssp             HTTCCCEEEEEEEEEEEEESSSCEEEEEEEETTEEEEEEEEEEESEEEEEEECTTCCEEEEEEEHHHHHHHHHHHHHHTT
T ss_pred             HHHCCCCCCEEEECCEEEEECCCEEEECCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEEECCHHHHHHHHHHHCCCC
T ss_conf             21014667569878704860684776035665555754320023666889832789639999802101224058572288


Q ss_pred             EEEEEECCHHHHHHHHHHHHHHHHHC
Q ss_conf             68536478899999999999998504
Q gi|254780297|r  144 ILFIDHLSRLKRDMITKKMSKLVQLR  169 (170)
Q Consensus       144 ~lf~drls~~kr~~~~~k~~k~~k~k  169 (170)
                      ++|+||+++.++..+.++++++.+.+
T Consensus       161 ~lf~Drl~~~~~~~~~~~~~~~~~~~  186 (197)
T 1zxz_A          161 NLYVDKMVPRTFRTVDNLDLPLAEGC  186 (197)
T ss_dssp             CCGGGTBCTTCCEEGGGTTSCCCTTC
T ss_pred             EEEEECCCHHHHHHHHHHHHHHHHCC
T ss_conf             88565029889999998888776269