HHsearch alignment of GI: 254780297 and MMDB domain: 2aia_A_
>2aia_A (A:) Peptide deformylase; hydrolase; HET: SB8; 1.70A {Streptococcus pneumoniae} PDB: 2ai7_A* 2aie_P* 1lm6_A 2os3_A*
Probab=100.00 E-value=0 Score=370.42 Aligned_cols=165 Identities=28% Similarity=0.387 Sum_probs=149.1
Q ss_pred CCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHH-------------HHHHHHHCCCCCEEEHHHCCCCCEEEEECCCCC
Q ss_conf 9877364576931052121378788899999999-------------998650047642130220144000377316432
Q gi|254780297|r 1 MVKKPLVIFPDPILRRVSRPIEKINSDIMNLIDN-------------MLEVMYSTDGIGLAAVQIGVLYRLVVIDLQDHA 67 (170)
Q Consensus 1 M~~~~Iv~~~dp~L~~~~~~v~~~~~~~~~li~d-------------m~~tm~~~~GvGLAA~QIG~~~ri~vv~~~~~~ 67 (170)
|++++|++||||+||++|+||+.+++++.+++.+ |++||++++||||||||||+++|+||++.++..
T Consensus 14 m~~~~I~~~~~p~Lr~~a~~V~~~~~~~~~~~~~~l~~~~~~~~~~~m~~tm~~~~gvGLAApQIG~~~ri~vi~~~~~~ 93 (203)
T 2aia_A 14 IDMCDIIREGNPSLRTVAEEVTFPLSDQEIILGEKMMQFLKHSQDPVMAEKMGLRGGVGLAAPQLDISKRIIAVLVPNIV 93 (203)
T ss_dssp CCGGGSCCTTCGGGGSCCBCCCSSCCHHHHHHHHHHHHHHHHHTCHHHHHHHTCCCCSEEEGGGGTCCBSEEEEEEEC--
T ss_pred CCHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEECCEEEEEEEEEEEECCCCH
T ss_conf 75867743799799377840588875788887899999999610377999998667852141153010249999846605
Q ss_pred CC--------CCCCEECCCCCCCHHHHH--HHHHHHCCCCC-CCCHHHHHCCHHEEEEECCCCCEEEEEEECCEEEEEEE
Q ss_conf 33--------482100164420100000--11100000122-32101211000002463235855799972976464327
Q gi|254780297|r 68 HR--------KNPMVFINPKIITFSDDF--SVYQEGCLSIP-DYRADVKRSAFITVRYMDCNAQHQIIYADGLLATCLQH 136 (170)
Q Consensus 68 ~~--------~~~~~~iNP~I~~~s~e~--~~~~EGCLS~P-g~~~~V~R~~~I~v~~~d~~G~~~~~~~~g~~Ar~~QH 136 (170)
.. ..+.+||||+|++.|.++ ..++|||||+| |+++.|.||.+|+|+|+|++|++++.+++||+|||+||
T Consensus 94 ~~~~~~~~~~~~~~v~INP~i~~~s~~~~~~~~~EGCLS~p~~~~~~V~R~~~I~v~~~d~~G~~~~~~~~G~~Ar~~QH 173 (203)
T 2aia_A 94 EEGETPQEAYDLEAIMYNPKIVSHSVQDAALGEGEGCLSVDRNVPGYVVRHARVTVDYFDKDGEKHRIKLKGYNSIVVQH 173 (203)
T ss_dssp --------CEEEEEEEEEEEEEEECSSEEEETTCCCCTTCCSCCCSCBCEESCEEEEEECTTSCEEEEEECHHHHHHHHH
T ss_pred HHCCCCCCCCCCCCEEECCCCEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHEEEEEECCCCCEEEEEECCHHHHHHHH
T ss_conf 42022233456552453143101003313553035774667554211100100002563554560489971566777857
Q ss_pred EHHHHCCEEEEEECCHHHHHHHHHHHHHH
Q ss_conf 00131976853647889999999999999
Q gi|254780297|r 137 ELDHLNGILFIDHLSRLKRDMITKKMSKL 165 (170)
Q Consensus 137 EiDHL~G~lf~drls~~kr~~~~~k~~k~ 165 (170)
|+|||+|++|+||+++.++..+.++++|+
T Consensus 174 EiDHL~G~l~~Dr~~~~~~~~~~~~~~~l 202 (203)
T 2aia_A 174 EIDHINGIMFYDRINEKDPFAVKDGLLIL 202 (203)
T ss_dssp HHHHHTTCCGGGGBCSSCTTCCCTTEEEE
T ss_pred HHHHHCCEEEHHHCCCCCHHHHHHHHHHC
T ss_conf 86830887204414834546788777642